FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038842 through 18771 annotations produced 2 hits

(CG5630):

Annotation Number : S.C3R002243
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038842
Gbrowse : chr3R:16754401-16754723 (+) // 100.0 //
Probeset : 1632558_at
Accessions : protein= NP_001097851; /// NP_650929;, nucleotide= NM_001104381; /// NM_142672;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0038842.
VDRC has 2 RNAi stocks for FBgn0038842 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	17 ± 0	0 of 4	0.30	Down
Head	71 ± 2	4 of 4	1.20	Up
Eye	47 ± 4	4 of 4	0.83	None
Thoracicoabdominal ganglion	17 ± 4	0 of 4	0.30	Down
Salivary gland	1979 ± 123	4 of 4	34.50	Up
Crop	407 ± 7	4 of 4	7.10	Up
Midgut	60 ± 3	2 of 4	1.10	None
Tubule	246 ± 24	4 of 4	4.30	Up
Hindgut	370 ± 3	4 of 4	6.50	Up
Heart	73 ± 8	4 of 4	1.27	None
Fat body	9 ± 3	0 of 4	0.16	Down
Ovary	18 ± 1	0 of 4	0.30	Down
Testis	26 ± 2	0 of 4	0.50	Down
Male accessory glands	33 ± 3	0 of 4	0.60	Down
Virgin spermatheca	213 ± 27	4 of 4	3.71	Up
Mated spermatheca	250 ± 26	4 of 4	4.36	Up
Adult carcass	170 ± 8	4 of 4	3.00	Up
Larval CNS	35 ± 3	4 of 4	0.62	Down
Larval Salivary gland	357 ± 7	4 of 4	6.23	Up
Larval midgut	65 ± 5	3 of 4	1.13	None
Larval tubule	374 ± 18	4 of 4	6.50	Up
Larval hindgut	365 ± 5	4 of 4	6.37	Up
Larval fat body	11 ± 4	0 of 4	0.20	Down
Larval trachea	373 ± 25	4 of 4	6.51	Up
Larval carcass	701 ± 33	4 of 4	12.23	Up
S2 cells (growing)	33 ± 4	0 of 4	0.58	Down
Whole fly	57 ± 2	4 of 4

(CG5630):

Annotation Number : CG5630
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038842
Gbrowse : chr3R:16740022-16753344 (+) // 100.0 //
Probeset : 1635375_at
Accessions : protein= NP_001097851; /// NP_650929;, nucleotide= NM_001104381; /// NM_142672;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0038842.
VDRC has 2 RNAi stocks for FBgn0038842 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	46 ± 2	4 of 4	0.50	Down
Head	152 ± 8	4 of 4	1.50	Up
Eye	74 ± 2	4 of 4	0.73	None
Thoracicoabdominal ganglion	62 ± 9	4 of 4	0.60	Down
Salivary gland	4805 ± 277	4 of 4	46.56	Up
Crop	506 ± 14	4 of 4	4.90	Up
Midgut	148 ± 11	4 of 4	1.40	Up
Tubule	357 ± 67	4 of 4	3.50	Up
Hindgut	319 ± 7	4 of 4	3.10	Up
Heart	161 ± 8	4 of 4	1.57	Up
Fat body	22 ± 5	1 of 4	0.21	Down
Ovary	46 ± 2	4 of 4	0.50	Down
Testis	72 ± 1	4 of 4	0.70	Down
Male accessory glands	24 ± 5	1 of 4	0.20	Down
Virgin spermatheca	165 ± 15	4 of 4	1.60	Up
Mated spermatheca	214 ± 31	4 of 4	2.08	Up
Adult carcass	208 ± 10	4 of 4	2.00	Up
Larval CNS	240 ± 21	4 of 4	2.33	Up
Larval Salivary gland	984 ± 66	4 of 4	9.54	Up
Larval midgut	83 ± 6	4 of 4	0.80	None
Larval tubule	729 ± 25	4 of 4	7.10	Up
Larval hindgut	364 ± 6	4 of 4	3.53	Up
Larval fat body	122 ± 13	4 of 4	1.20	None
Larval trachea	561 ± 61	4 of 4	5.44	Up
Larval carcass	407 ± 14	4 of 4	3.95	Up
S2 cells (growing)	622 ± 13	4 of 4	6.03	Up
Whole fly	103 ± 9	4 of 4

Looking for FBgn0038842. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720