FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038852 through 18771 annotations produced 1 hits

(CG7056):

Annotation Number : CG7056
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038852
Gbrowse : chr3R:16902635-16906252 (-) // 100.0 //
Probeset : 1628850_at
Accessions : protein= NP_650938;, nucleotide= NM_142681;
Pathway : DNA-dependent // inferred from electronic annotation /// 0045449 // regulation of transcription // inferred from sequen
Interpro : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
FlyMine data for FBgn0038852.
Homophila reports that CG7056 is a close match (6e-16) to human gene (NP_002720), a gene associated with .
BioGrid reports that CG7056 interacts with CG7937 CG7576 CG7823 .
VDRC has 3 RNAi stocks for FBgn0038852 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.40	None
Head	2 ± 0	0 of 4	0.40	None
Eye	1 ± 0	0 of 4	0.20	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.20	None
Salivary gland	3 ± 1	0 of 4	0.64	None
Crop	4 ± 1	0 of 4	0.80	None
Midgut	3 ± 1	0 of 4	0.70	None
Tubule	2 ± 0	0 of 4	0.50	Down
Hindgut	2 ± 1	0 of 4	0.50	None
Heart	4 ± 2	0 of 4	0.87	None
Fat body	2 ± 1	0 of 4	0.49	None
Ovary	2 ± 0	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.30	None
Male accessory glands	3 ± 0	0 of 4	0.60	None
Virgin spermatheca	2 ± 1	0 of 4	0.54	None
Mated spermatheca	4 ± 2	0 of 4	0.78	None
Adult carcass	2 ± 0	0 of 4	0.40	None
Larval CNS	1 ± 0	0 of 4	0.20	None
Larval Salivary gland	3 ± 1	0 of 4	0.72	None
Larval midgut	46 ± 4	3 of 4	8.83	Up
Larval tubule	1 ± 0	0 of 4	0.30	None
Larval hindgut	1 ± 0	0 of 4	0.32	None
Larval fat body	3 ± 0	0 of 4	0.60	None
Larval trachea	2 ± 2	0 of 4	0.50	None
Larval carcass	4 ± 1	0 of 4	0.75	None
S2 cells (growing)	88 ± 2	4 of 4	16.64	Up
Whole fly	5 ± 2	0 of 4

Looking for FBgn0038852. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720