FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038869 through 18771 annotations produced 1 hits

(CG3353):

Annotation Number : CG3353
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038869
Gbrowse : chr3R:17042987-17044511 (-) // 100.0 //
Probeset : 1633110_at
Accessions : protein= NP_650955;, nucleotide= NM_142698;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0038869.
BDGP gene expression has embryonic in situ data for CG3353: 15 pix of staining in 5 body parts.
BioGrid reports that CG3353 interacts with CG3919 CG7172 CG7269 CG8295 .
TRiP has 1 RNAi stocks for FBgn0038869 available for purchase.
VDRC has 2 RNAi stocks for FBgn0038869 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	55 ± 1	4 of 4	0.70	Down
Head	44 ± 1	4 of 4	0.50	Down
Eye	56 ± 4	4 of 4	0.71	Down
Thoracicoabdominal ganglion	70 ± 4	4 of 4	0.90	None
Salivary gland	54 ± 4	4 of 4	0.67	Down
Crop	64 ± 4	4 of 4	0.80	Down
Midgut	41 ± 1	4 of 4	0.50	Down
Tubule	53 ± 5	4 of 4	0.70	Down
Hindgut	39 ± 2	4 of 4	0.50	Down
Heart	45 ± 4	4 of 4	0.56	Down
Fat body	50 ± 8	4 of 4	0.63	Down
Ovary	149 ± 2	4 of 4	1.90	Up
Testis	62 ± 2	4 of 4	0.80	Down
Male accessory glands	122 ± 6	4 of 4	1.50	Up
Virgin spermatheca	56 ± 2	4 of 4	0.70	Down
Mated spermatheca	90 ± 4	4 of 4	1.12	None
Adult carcass	52 ± 3	4 of 4	0.70	Down
Larval CNS	102 ± 10	4 of 4	1.27	Up
Larval Salivary gland	72 ± 2	4 of 4	0.90	Down
Larval midgut	44 ± 1	4 of 4	0.54	Down
Larval tubule	31 ± 3	4 of 4	0.40	Down
Larval hindgut	65 ± 6	4 of 4	0.81	None
Larval fat body	33 ± 4	4 of 4	0.40	Down
Larval trachea	136 ± 17	4 of 4	1.69	Up
Larval carcass	78 ± 15	4 of 4	0.97	None
S2 cells (growing)	108 ± 2	4 of 4	1.35	Up
Whole fly	80 ± 1	4 of 4

Looking for FBgn0038869. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720