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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0038892 through 18771 annotations produced 1 hits



(CG15498):

Annotation Number : CG15498
Flybase ID : FBgn0038892
Gbrowse : chr3R:17393240-17394871 (-) // 100.0 //
Probeset : 1624201_at
Accessions : protein= NP_650974;, nucleotide= NM_142717;
FlyMine data for FBgn0038892.
BDGP gene expression has embryonic in situ data for CG15498: 8 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0038892 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 10 of 4 0.10Down
Head5 10 of 4 0.10Down
Eye3 10 of 4 0.05Down
Thoracicoabdominal ganglion8 10 of 4 0.10Down
Salivary gland19 51 of 4 0.26Down
Crop5 10 of 4 0.10Down
Midgut6 00 of 4 0.10Down
Tubule4 00 of 4 0.10Down
Hindgut7 10 of 4 0.10Down
Heart2 10 of 4 0.03Down
Fat body7 20 of 4 0.10Down
Ovary1 00 of 4 0.00Down
Testis920 434 of 412.30Up
Male accessory glands2 00 of 4 0.00Down
Virgin spermatheca3 00 of 4 0.05Down
Mated spermatheca4 10 of 4 0.07Down
Adult carcass5 20 of 4 0.10Down
Larval CNS4 20 of 4 0.06Down
Larval Salivary gland4 10 of 4 0.06Down
Larval midgut3 00 of 4 0.05Down
Larval tubule4 00 of 4 0.10Down
Larval hindgut3 10 of 4 0.04Down
Larval fat body101 523 of 4 1.30None
Larval trachea6 61 of 4 0.09Down
Larval carcass2 10 of 4 0.03Down
S2 cells (growing)2 00 of 4 0.04Down
Whole fly74 94 of 4

Looking for FBgn0038892. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime