FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038894 through 18771 annotations produced 1 hits

(CG15497):

Annotation Number : CG15497
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038894
Gbrowse : chr3R:17491299-17492248 (+) // 100.0 //
Probeset : 1627368_at
Accessions : protein= NP_650976; /// NP_996177;, nucleotide= NM_142719; /// NM_206455;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0038894.
VDRC has 3 RNAi stocks for FBgn0038894 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 1	2 of 4	1.00	None
Head	23 ± 4	1 of 4	2.70	Up
Eye	18 ± 1	0 of 4	2.17	Up
Thoracicoabdominal ganglion	9 ± 0	0 of 4	1.10	None
Salivary gland	7 ± 2	0 of 4	0.89	None
Crop	6 ± 1	0 of 4	0.80	None
Midgut	7 ± 2	0 of 4	0.90	None
Tubule	5 ± 1	0 of 4	0.70	Down
Hindgut	5 ± 0	0 of 4	0.70	None
Heart	4 ± 0	1 of 4	0.56	None
Fat body	5 ± 5	0 of 4	0.58	None
Ovary	2 ± 0	0 of 4	0.30	None
Testis	3 ± 1	0 of 4	0.30	None
Male accessory glands	14 ± 3	1 of 4	1.60	None
Virgin spermatheca	3 ± 0	0 of 4	0.43	None
Mated spermatheca	4 ± 0	0 of 4	0.57	None
Adult carcass	27 ± 1	3 of 4	3.30	Up
Larval CNS	4 ± 2	1 of 4	0.56	None
Larval Salivary gland	1 ± 0	0 of 4	0.21	Down
Larval midgut	5 ± 1	0 of 4	0.59	None
Larval tubule	3 ± 1	0 of 4	0.40	None
Larval hindgut	5 ± 1	1 of 4	0.64	None
Larval fat body	6 ± 2	0 of 4	0.80	None
Larval trachea	33 ± 17	4 of 4	3.93	None
Larval carcass	4 ± 0	0 of 4	0.55	None
S2 cells (growing)	7 ± 0	3 of 4	0.82	None
Whole fly	8 ± 2	2 of 4

Looking for FBgn0038894. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720