FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0038983 through 18771 annotations produced 2 hits

(CG5326):

Annotation Number : CG5326
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038983
Gbrowse : chr3R:18359027-18365639 (-) // 100.0 //
Probeset : 1623589_a_at
Accessions : protein= NP_651060;, nucleotide= NM_142803;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0038983.
BDGP gene expression has embryonic in situ data for CG5326: 4 pix of staining in 1 body parts.
Homophila reports that CG5326 is a close match (9e-11) to human gene ADMD;ELOVL4;STGD2;STGD3 (NP_073563), a gene associated with Macular dystrophy, autosomal dominant, chromosome 6-linked, 600110 (3);Stargardt disease 3, 600110 (3).
VDRC has 5 RNAi stocks for FBgn0038983 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.10	Down
Head	94 ± 16	4 of 4	1.20	None
Eye	21 ± 4	3 of 4	0.27	Down
Thoracicoabdominal ganglion	6 ± 1	0 of 4	0.10	Down
Salivary gland	24 ± 4	0 of 4	0.30	Down
Crop	264 ± 10	4 of 4	3.30	Up
Midgut	25 ± 1	0 of 4	0.30	Down
Tubule	6 ± 1	0 of 4	0.10	Down
Hindgut	48 ± 1	2 of 4	0.60	Down
Heart	5 ± 1	0 of 4	0.07	Down
Fat body	9 ± 3	0 of 4	0.12	Down
Ovary	38 ± 5	4 of 4	0.50	Down
Testis	4 ± 0	0 of 4	0.10	Down
Male accessory glands	206 ± 22	4 of 4	2.60	Up
Virgin spermatheca	4 ± 1	0 of 4	0.05	Down
Mated spermatheca	8 ± 2	0 of 4	0.11	Down
Adult carcass	49 ± 2	0 of 4	0.60	Down
Larval CNS	10 ± 1	0 of 4	0.12	Down
Larval Salivary gland	16 ± 2	1 of 4	0.20	Down
Larval midgut	10 ± 2	0 of 4	0.13	Down
Larval tubule	11 ± 1	0 of 4	0.10	Down
Larval hindgut	28 ± 5	0 of 4	0.35	Down
Larval fat body	6 ± 1	0 of 4	0.10	Down
Larval trachea	24 ± 6	3 of 4	0.30	Down
Larval carcass	23 ± 4	0 of 4	0.30	Down
S2 cells (growing)	8 ± 1	0 of 4	0.10	Down
Whole fly	80 ± 8	4 of 4

(CG5326):

Annotation Number : CG5326
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038983
Gbrowse : chr3R:18357893-18365639 (-) // 100.0 //
Probeset : 1629511_at
Accessions : protein= NP_651060;, nucleotide= NM_142803;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0038983.
BDGP gene expression has embryonic in situ data for CG5326: 4 pix of staining in 1 body parts.
Homophila reports that CG5326 is a close match (9e-11) to human gene ADMD;ELOVL4;STGD2;STGD3 (NP_073563), a gene associated with Macular dystrophy, autosomal dominant, chromosome 6-linked, 600110 (3);Stargardt disease 3, 600110 (3).
VDRC has 5 RNAi stocks for FBgn0038983 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	1 of 4	0.00	Down
Head	263 ± 16	4 of 4	1.10	None
Eye	119 ± 16	4 of 4	0.50	Down
Thoracicoabdominal ganglion	4 ± 1	2 of 4	0.00	Down
Salivary gland	13 ± 6	0 of 4	0.06	Down
Crop	942 ± 35	4 of 4	3.90	Up
Midgut	9 ± 1	3 of 4	0.00	Down
Tubule	4 ± 1	0 of 4	0.00	Down
Hindgut	97 ± 4	4 of 4	0.40	Down
Heart	11 ± 3	3 of 4	0.05	Down
Fat body	11 ± 4	2 of 4	0.05	Down
Ovary	108 ± 8	4 of 4	0.50	Down
Testis	3 ± 1	2 of 4	0.00	Down
Male accessory glands	563 ± 12	4 of 4	2.30	Up
Virgin spermatheca	2 ± 1	0 of 4	0.01	Down
Mated spermatheca	7 ± 0	3 of 4	0.03	Down
Adult carcass	138 ± 13	4 of 4	0.60	Down
Larval CNS	16 ± 6	4 of 4	0.07	Down
Larval Salivary gland	20 ± 2	4 of 4	0.08	Down
Larval midgut	6 ± 1	2 of 4	0.03	Down
Larval tubule	5 ± 1	1 of 4	0.00	Down
Larval hindgut	101 ± 16	4 of 4	0.42	Down
Larval fat body	3 ± 0	0 of 4	0.00	Down
Larval trachea	99 ± 14	4 of 4	0.42	Down
Larval carcass	88 ± 17	4 of 4	0.37	Down
S2 cells (growing)	1 ± 0	0 of 4	0.01	Down
Whole fly	240 ± 15	4 of 4

Looking for FBgn0038983. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720