FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039038 through 18771 annotations produced 1 hits

(CG6688):

Annotation Number : CG6688
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039038
Gbrowse : chr3R:18838235-18840796 (+) // 100.0 //
Probeset : 1639624_at
Accessions : protein= NP_651110;, nucleotide= NM_142853;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0039038.
BioGrid reports that CG6688 interacts with CG7676 .
TRiP has 1 RNAi stocks for FBgn0039038 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039038 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.30	Down
Head	1 ± 0	0 of 4	0.20	Down
Eye	2 ± 1	0 of 4	0.38	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.40	Down
Salivary gland	578 ± 16	4 of 4	80.30	Up
Crop	407 ± 5	4 of 4	56.60	Up
Midgut	7 ± 1	0 of 4	1.10	None
Tubule	19 ± 4	2 of 4	2.70	Up
Hindgut	37 ± 1	4 of 4	5.20	Up
Heart	2 ± 1	0 of 4	0.40	None
Fat body	5 ± 2	0 of 4	0.77	None
Ovary	1 ± 0	0 of 4	0.20	Down
Testis	11 ± 0	4 of 4	1.60	Up
Male accessory glands	2 ± 1	0 of 4	0.30	Down
Virgin spermatheca	1 ± 0	0 of 4	0.17	Down
Mated spermatheca	0 ± 0	0 of 4	0.12	Down
Adult carcass	9 ± 1	0 of 4	1.30	None
Larval CNS	2 ± 1	0 of 4	0.28	Down
Larval Salivary gland	83 ± 8	4 of 4	11.53	Up
Larval midgut	3 ± 2	0 of 4	0.45	None
Larval tubule	28 ± 2	4 of 4	3.90	Up
Larval hindgut	28 ± 3	4 of 4	3.91	Up
Larval fat body	2 ± 1	0 of 4	0.30	Down
Larval trachea	6 ± 3	1 of 4	0.89	None
Larval carcass	2 ± 1	0 of 4	0.40	None
S2 cells (growing)	0 ± 0	0 of 4	0.10	Down
Whole fly	7 ± 0	1 of 4

Looking for FBgn0039038. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720