FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039109 through 18771 annotations produced 1 hits

(CG10365):

Annotation Number : CG10365
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039109
Gbrowse : chr3R:19549085-19557227 (+) // 100.0 //
Probeset : 1637983_s_at
Accessions : protein= NP_651176; /// NP_732896; /// NP_732897; /// NP_996270;, nucleotide= NM_142919; /// NM_170086; /// NM_170087; /// NM_206547;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0039109.
BDGP gene expression has embryonic in situ data for CG10365: 4 pix of staining in 1 body parts.
BioGrid reports that CG10365 interacts with CG13084 CG17836 CG3186 CG12589 CG32264 CG3731 CG5939 CG9025 .
VDRC has 3 RNAi stocks for FBgn0039109 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	330 ± 26	4 of 4	0.80	None
Head	272 ± 19	4 of 4	0.70	Down
Eye	114 ± 5	4 of 4	0.29	Down
Thoracicoabdominal ganglion	318 ± 14	4 of 4	0.80	Down
Salivary gland	1503 ± 60	4 of 4	3.86	Up
Crop	595 ± 19	4 of 4	1.50	Up
Midgut	197 ± 5	4 of 4	0.50	Down
Tubule	1226 ± 8	4 of 4	3.10	Up
Hindgut	386 ± 8	4 of 4	1.00	None
Heart	206 ± 12	4 of 4	0.53	Down
Fat body	382 ± 49	4 of 4	0.98	None
Ovary	151 ± 4	4 of 4	0.40	Down
Testis	1467 ± 27	4 of 4	3.80	Up
Male accessory glands	334 ± 14	4 of 4	0.90	Down
Virgin spermatheca	532 ± 35	4 of 4	1.36	Up
Mated spermatheca	386 ± 22	4 of 4	0.99	None
Adult carcass	656 ± 32	4 of 4	1.70	Up
Larval CNS	77 ± 18	4 of 4	0.20	Down
Larval Salivary gland	65 ± 14	3 of 4	0.17	Down
Larval midgut	419 ± 115	4 of 4	1.08	None
Larval tubule	2068 ± 33	4 of 4	5.30	Up
Larval hindgut	149 ± 17	4 of 4	0.38	Down
Larval fat body	448 ± 30	4 of 4	1.20	None
Larval trachea	253 ± 89	4 of 4	0.65	None
Larval carcass	479 ± 119	4 of 4	1.23	None
S2 cells (growing)	398 ± 15	4 of 4	1.02	None
Whole fly	389 ± 12	4 of 4

Looking for FBgn0039109. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720