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FlyAtlas: the Drosophila gene expression atlas

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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0039113 through 18771 annotations produced 1 hits



(CG10217):

Annotation Number : CG10217
Flybase ID : FBgn0039113
Gbrowse : chr3R:19586458-19588977 (-) // 100.0 //
Probeset : 1636144_s_at
Accessions : protein= NP_651182; /// NP_732903;, nucleotide= NM_142925; /// NM_170091;
FlyMine data for FBgn0039113.
BioGrid reports that CG10217 interacts with CG13627 .
VDRC has 3 RNAi stocks for FBgn0039113 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain90 44 of 4 0.50Down
Head205 14 of 4 1.10None
Eye282 134 of 4 1.46Up
Thoracicoabdominal ganglion88 54 of 4 0.50Down
Salivary gland274 34 of 4 1.42Up
Crop485 64 of 4 2.50Up
Midgut19 21 of 4 0.10Down
Tubule17 41 of 4 0.10Down
Hindgut360 74 of 4 1.90Up
Heart53 34 of 4 0.28Down
Fat body63 124 of 4 0.33Down
Ovary359 44 of 4 1.90Up
Testis92 34 of 4 0.50Down
Male accessory glands517 124 of 4 2.70Up
Virgin spermatheca204 74 of 4 1.06None
Mated spermatheca272 204 of 4 1.41Up
Adult carcass142 74 of 4 0.70Down
Larval CNS133 114 of 4 0.69Down
Larval Salivary gland265 94 of 4 1.37Up
Larval midgut41 34 of 4 0.21Down
Larval tubule16 10 of 4 0.10Down
Larval hindgut411 264 of 4 2.12Up
Larval fat body364 534 of 4 1.90Up
Larval trachea572 444 of 4 2.96Up
Larval carcass296 84 of 4 1.53Up
S2 cells (growing)205 44 of 4 1.06None
Whole fly193 44 of 4

Looking for FBgn0039113. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime