FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039120 through 18771 annotations produced 1 hits

Nup98 (Nup98):

Annotation Number : CG10198
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039120
Gbrowse : chr3R:19599949-19607366 (-) // 100.0 //
Probeset : 1632194_at
Accessions : protein= NP_651187;, nucleotide= NM_142930;
Pathway : engulfment // inferred from mutant phenotype"
Interpro : 0005643 // nuclear pore // inferred from sequence or structural similarity /// 0005643 // nuclear pore // inferred from
FlyMine data for FBgn0039120.
BioGrid reports that CG10198 interacts with CG10594 CG4303 .
TRiP has 1 RNAi stocks for FBgn0039120 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039120 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	64 ± 4	4 of 4	0.60	None
Head	41 ± 4	4 of 4	0.40	Down
Eye	31 ± 3	4 of 4	0.30	Down
Thoracicoabdominal ganglion	57 ± 2	4 of 4	0.60	Down
Salivary gland	50 ± 10	0 of 4	0.49	Down
Crop	44 ± 3	4 of 4	0.40	Down
Midgut	41 ± 5	1 of 4	0.40	Down
Tubule	50 ± 4	3 of 4	0.50	Down
Hindgut	50 ± 3	4 of 4	0.50	Down
Heart	32 ± 2	4 of 4	0.32	Down
Fat body	55 ± 10	1 of 4	0.53	Down
Ovary	277 ± 3	4 of 4	2.70	Up
Testis	120 ± 8	4 of 4	1.20	None
Male accessory glands	67 ± 6	4 of 4	0.70	None
Virgin spermatheca	34 ± 3	4 of 4	0.33	Down
Mated spermatheca	43 ± 6	4 of 4	0.42	Down
Adult carcass	48 ± 4	1 of 4	0.50	Down
Larval CNS	218 ± 5	4 of 4	2.11	Up
Larval Salivary gland	113 ± 10	4 of 4	1.10	None
Larval midgut	49 ± 1	1 of 4	0.48	Down
Larval tubule	57 ± 2	4 of 4	0.60	Down
Larval hindgut	89 ± 5	4 of 4	0.86	None
Larval fat body	67 ± 7	4 of 4	0.60	None
Larval trachea	147 ± 16	4 of 4	1.43	Up
Larval carcass	105 ± 7	4 of 4	1.02	None
S2 cells (growing)	349 ± 6	4 of 4	3.38	Up
Whole fly	103 ± 13	4 of 4

Looking for FBgn0039120. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720