Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0039124 through 18771 annotations produced 1 hits



(CG13597):

Annotation Number : CG13597
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039124
Gbrowse : chr3R:19717405-19719105 (-) // 100.0 //
Probeset : 1624694_at
Accessions : protein= NP_651190;, nucleotide= NM_142933;
Pathway : via spliceosome // inferred by curator"
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay
FlyMine data for FBgn0039124.
BDGP gene expression has embryonic in situ data for CG13597: 4 pix of staining in 1 body parts.
BioGrid reports that CG13597 interacts with CG2046 CG9573 .
TRiP has 1 RNAi stocks for FBgn0039124 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039124 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.10Down
Head4 ± 10 of 4 0.20Down
Eye3 ± 10 of 4 0.15Down
Thoracicoabdominal ganglion6 ± 21 of 4 0.30Down
Salivary gland10 ± 11 of 4 0.42Down
Crop6 ± 10 of 4 0.30Down
Midgut5 ± 10 of 4 0.20Down
Tubule4 ± 00 of 4 0.20Down
Hindgut6 ± 00 of 4 0.30Down
Heart3 ± 00 of 4 0.14Down
Fat body9 ± 32 of 4 0.38Down
Ovary2 ± 01 of 4 0.10Down
Testis422 ± 144 of 417.50Up
Male accessory glands3 ± 10 of 4 0.10Down
Virgin spermatheca11 ± 12 of 4 0.48Down
Mated spermatheca9 ± 02 of 4 0.40Down
Adult carcass12 ± 21 of 4 0.50Down
Larval CNS5 ± 11 of 4 0.23Down
Larval Salivary gland6 ± 11 of 4 0.29Down
Larval midgut3 ± 10 of 4 0.14Down
Larval tubule6 ± 20 of 4 0.30Down
Larval hindgut5 ± 00 of 4 0.21Down
Larval fat body82 ± 394 of 4 3.40None
Larval trachea6 ± 10 of 4 0.29Down
Larval carcass3 ± 10 of 4 0.14Down
S2 cells (growing)3 ± 10 of 4 0.14Down
Whole fly24 ± 14 of 4

Looking for FBgn0039124. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime