FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039128 through 18771 annotations produced 1 hits

(CG13599):

Annotation Number : CG13599
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039128
Gbrowse : chr3R:19757364-19758383 (+) // 100.0 //
Probeset : 1634621_at
Accessions : protein= NP_651194;, nucleotide= NM_142937;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0039128.
BDGP gene expression has embryonic in situ data for CG13599: 4 pix of staining in 1 body parts.
BioGrid reports that CG13599 interacts with CG2227 CG9796 .
VDRC has 1 RNAi stocks for FBgn0039128 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 2	1 of 4	0.10	Down
Head	8 ± 1	0 of 4	0.10	Down
Eye	6 ± 1	2 of 4	0.07	Down
Thoracicoabdominal ganglion	8 ± 0	0 of 4	0.10	Down
Salivary gland	18 ± 5	0 of 4	0.22	Down
Crop	12 ± 0	2 of 4	0.20	Down
Midgut	15 ± 2	0 of 4	0.20	Down
Tubule	5 ± 0	0 of 4	0.10	Down
Hindgut	10 ± 1	1 of 4	0.10	Down
Heart	3 ± 1	1 of 4	0.04	Down
Fat body	6 ± 2	0 of 4	0.08	Down
Ovary	168 ± 6	4 of 4	2.00	Up
Testis	63 ± 2	4 of 4	0.80	Down
Male accessory glands	3 ± 1	0 of 4	0.00	Down
Virgin spermatheca	3 ± 1	0 of 4	0.04	Down
Mated spermatheca	3 ± 1	0 of 4	0.04	Down
Adult carcass	8 ± 5	0 of 4	0.10	Down
Larval CNS	85 ± 4	4 of 4	1.02	None
Larval Salivary gland	27 ± 1	3 of 4	0.33	Down
Larval midgut	14 ± 1	0 of 4	0.17	Down
Larval tubule	15 ± 2	3 of 4	0.20	Down
Larval hindgut	11 ± 0	3 of 4	0.14	Down
Larval fat body	18 ± 2	2 of 4	0.20	Down
Larval trachea	25 ± 3	4 of 4	0.30	Down
Larval carcass	17 ± 2	2 of 4	0.21	Down
S2 cells (growing)	49 ± 3	4 of 4	0.59	Down
Whole fly	83 ± 3	4 of 4

Looking for FBgn0039128. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720