FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039141 through 18771 annotations produced 2 hits

Dspastin (spas):

Annotation Number : CG5977
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039141
Gbrowse : chr3R:19863939-19867573 (+) // 100.0 //
Probeset : 1628019_a_at
Accessions : protein= NP_651206; /// NP_732941;, nucleotide= NM_142949; /// NM_170115;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from phy
FlyMine data for FBgn0039141.
Homophila reports that CG5977 is a close match (3e-15) to human gene CAR;CMAR;PGN;SPG7 (NP_955399), a gene associated with Spastic paraplegia-7, 607259 (3).
TRiP has 1 RNAi stocks for FBgn0039141 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039141 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	75 ± 1	4 of 4	0.90	None
Head	29 ± 4	4 of 4	0.40	Down
Eye	15 ± 2	3 of 4	0.19	Down
Thoracicoabdominal ganglion	62 ± 7	4 of 4	0.80	None
Salivary gland	53 ± 6	4 of 4	0.66	Down
Crop	31 ± 1	4 of 4	0.40	Down
Midgut	34 ± 3	4 of 4	0.40	Down
Tubule	27 ± 1	4 of 4	0.30	Down
Hindgut	37 ± 2	4 of 4	0.50	Down
Heart	12 ± 1	4 of 4	0.15	Down
Fat body	21 ± 3	4 of 4	0.26	Down
Ovary	115 ± 6	4 of 4	1.40	Up
Testis	222 ± 9	4 of 4	2.70	Up
Male accessory glands	27 ± 2	3 of 4	0.30	Down
Virgin spermatheca	9 ± 1	2 of 4	0.12	Down
Mated spermatheca	9 ± 0	1 of 4	0.12	Down
Adult carcass	24 ± 3	4 of 4	0.30	Down
Larval CNS	84 ± 10	4 of 4	1.04	None
Larval Salivary gland	47 ± 2	4 of 4	0.58	Down
Larval midgut	37 ± 5	4 of 4	0.46	Down
Larval tubule	79 ± 4	4 of 4	1.00	None
Larval hindgut	52 ± 4	4 of 4	0.64	Down
Larval fat body	93 ± 26	4 of 4	1.20	None
Larval trachea	23 ± 1	4 of 4	0.29	Down
Larval carcass	29 ± 4	4 of 4	0.37	Down
S2 cells (growing)	172 ± 1	4 of 4	2.12	Up
Whole fly	81 ± 8	4 of 4

Dspastin (spas):

Annotation Number : CG5977
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039141
Gbrowse : chr3R:19863939-19868376 (+) // 100.0 //
Probeset : 1629123_at
Accessions : protein= NP_651206; /// NP_732941;, nucleotide= NM_142949; /// NM_170115;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from phy
FlyMine data for FBgn0039141.
Homophila reports that CG5977 is a close match (3e-15) to human gene CAR;CMAR;PGN;SPG7 (NP_955399), a gene associated with Spastic paraplegia-7, 607259 (3).
TRiP has 1 RNAi stocks for FBgn0039141 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039141 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	315 ± 18	4 of 4	2.10	Up
Head	100 ± 5	4 of 4	0.70	Down
Eye	31 ± 2	4 of 4	0.22	Down
Thoracicoabdominal ganglion	291 ± 31	4 of 4	2.00	Up
Salivary gland	112 ± 7	4 of 4	0.76	Down
Crop	68 ± 2	4 of 4	0.50	Down
Midgut	69 ± 6	4 of 4	0.50	Down
Tubule	125 ± 4	4 of 4	0.90	Down
Hindgut	97 ± 2	4 of 4	0.70	Down
Heart	36 ± 2	4 of 4	0.25	Down
Fat body	65 ± 2	4 of 4	0.45	Down
Ovary	322 ± 10	4 of 4	2.20	Up
Testis	30 ± 5	4 of 4	0.20	Down
Male accessory glands	61 ± 4	4 of 4	0.40	Down
Virgin spermatheca	64 ± 8	4 of 4	0.44	Down
Mated spermatheca	51 ± 3	4 of 4	0.35	Down
Adult carcass	62 ± 5	4 of 4	0.40	Down
Larval CNS	304 ± 30	4 of 4	2.07	Up
Larval Salivary gland	158 ± 12	4 of 4	1.08	None
Larval midgut	93 ± 11	4 of 4	0.64	Down
Larval tubule	256 ± 17	4 of 4	1.70	Up
Larval hindgut	193 ± 9	4 of 4	1.32	Up
Larval fat body	94 ± 4	4 of 4	0.60	Down
Larval trachea	102 ± 6	4 of 4	0.70	Down
Larval carcass	120 ± 15	4 of 4	0.82	None
S2 cells (growing)	142 ± 5	4 of 4	0.97	None
Whole fly	146 ± 9	4 of 4

Looking for FBgn0039141. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720