Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0039184 through 18771 annotations produced 1 hits



(CG6432):

Annotation Number : CG6432
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039184
Gbrowse : chr3R:20162643-20165919 (+) // 100.0 //
Probeset : 1623363_at
Accessions : protein= NP_651247;, nucleotide= NM_142990;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0003987 // acetate-CoA ligase activity // infer
FlyMine data for FBgn0039184.
VDRC has 1 RNAi stocks for FBgn0039184 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head0 ± 00 of 4 0.00Down
Eye0 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion7 ± 20 of 4 0.10Down
Salivary gland1 ± 00 of 4 0.02Down
Crop9 ± 30 of 4 0.10Down
Midgut5 ± 20 of 4 0.00Down
Tubule10 ± 40 of 4 0.10Down
Hindgut12 ± 32 of 4 0.10Down
Heart939 ± 484 of 4 7.81Up
Fat body1069 ± 1474 of 4 8.89Up
Ovary3 ± 10 of 4 0.00Down
Testis1 ± 00 of 4 0.00Down
Male accessory glands8 ± 30 of 4 0.10Down
Virgin spermatheca2 ± 10 of 4 0.02Down
Mated spermatheca4 ± 31 of 4 0.04Down
Adult carcass898 ± 94 of 4 7.50Up
Larval CNS3 ± 20 of 4 0.03Down
Larval Salivary gland1 ± 00 of 4 0.01Down
Larval midgut3 ± 10 of 4 0.03Down
Larval tubule6 ± 20 of 4 0.10Down
Larval hindgut5 ± 10 of 4 0.04Down
Larval fat body6 ± 30 of 4 0.10Down
Larval trachea2 ± 20 of 4 0.02Down
Larval carcass39 ± 34 of 4 0.33Down
S2 cells (growing)2 ± 00 of 4 0.02Down
Whole fly120 ± 64 of 4

Looking for FBgn0039184. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime