FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039209 through 18771 annotations produced 1 hits

(CG13624):

Annotation Number : CG13624
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039209
Gbrowse : chr3R:20385001-20408577 (-) // 100.0 //
Probeset : 1636321_s_at
Accessions : protein= NP_001036752; /// NP_001036753; /// NP_651271; /// NP_733012; /// NP_733013; /// NP_733014;, nucleotide= NM_001043287; /// NM_001043288; /// NM_143014; /// NM_170150; /// NM_170151; /// NM_170152;
Pathway : DNA-dependent // inferred from electronic annotation"
FlyMine data for FBgn0039209.
BDGP gene expression has embryonic in situ data for CG13624: 30 pix of staining in 20 body parts.
BioGrid reports that CG13624 interacts with CG18619 CG15423 CG18548 CG4568 CG7371 .
TRiP has 2 RNAi stocks for FBgn0039209 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039209 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	178 ± 3	4 of 4	2.00	Up
Head	99 ± 5	4 of 4	1.10	None
Eye	94 ± 11	4 of 4	1.06	None
Thoracicoabdominal ganglion	116 ± 5	4 of 4	1.30	Up
Salivary gland	171 ± 27	4 of 4	1.94	None
Crop	138 ± 5	4 of 4	1.60	Up
Midgut	97 ± 9	4 of 4	1.10	None
Tubule	135 ± 8	4 of 4	1.50	Up
Hindgut	110 ± 6	4 of 4	1.30	Up
Heart	195 ± 19	4 of 4	2.21	Up
Fat body	247 ± 37	4 of 4	2.80	Up
Ovary	160 ± 3	4 of 4	1.80	Up
Testis	16 ± 0	4 of 4	0.20	Down
Male accessory glands	126 ± 4	4 of 4	1.40	Up
Virgin spermatheca	122 ± 9	4 of 4	1.39	Up
Mated spermatheca	155 ± 5	4 of 4	1.76	Up
Adult carcass	124 ± 4	4 of 4	1.40	Up
Larval CNS	128 ± 14	4 of 4	1.46	Up
Larval Salivary gland	88 ± 6	4 of 4	1.00	None
Larval midgut	171 ± 18	4 of 4	1.94	Up
Larval tubule	178 ± 10	4 of 4	2.00	Up
Larval hindgut	192 ± 3	4 of 4	2.17	Up
Larval fat body	91 ± 6	4 of 4	1.00	None
Larval trachea	116 ± 16	4 of 4	1.32	Up
Larval carcass	148 ± 15	4 of 4	1.68	Up
S2 cells (growing)	240 ± 5	4 of 4	2.73	Up
Whole fly	88 ± 5	4 of 4

Looking for FBgn0039209. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720