FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039233 through 18771 annotations produced 1 hits

(CG7006):

Annotation Number : CG7006
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039233
Gbrowse : chr3R:20676353-20677107 (+) // 100.0 //
Probeset : 1633247_at
Accessions : protein= NP_651296;, nucleotide= NM_143039;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic
FlyMine data for FBgn0039233.
BDGP gene expression has embryonic in situ data for CG7006: 13 pix of staining in 7 body parts.
BioGrid reports that CG7006 interacts with CG8155 CG8472 CG9511 .
VDRC has 3 RNAi stocks for FBgn0039233 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	47 ± 1	4 of 4	0.20	Down
Head	76 ± 2	4 of 4	0.40	Down
Eye	42 ± 2	4 of 4	0.20	Down
Thoracicoabdominal ganglion	45 ± 1	4 of 4	0.20	Down
Salivary gland	73 ± 1	4 of 4	0.35	Down
Crop	93 ± 3	4 of 4	0.50	Down
Midgut	94 ± 5	4 of 4	0.50	Down
Tubule	35 ± 5	4 of 4	0.20	Down
Hindgut	64 ± 1	4 of 4	0.30	Down
Heart	67 ± 3	4 of 4	0.32	Down
Fat body	94 ± 10	4 of 4	0.46	Down
Ovary	365 ± 2	4 of 4	1.80	Up
Testis	80 ± 1	4 of 4	0.40	Down
Male accessory glands	189 ± 6	4 of 4	0.90	None
Virgin spermatheca	46 ± 1	4 of 4	0.23	Down
Mated spermatheca	82 ± 2	4 of 4	0.40	Down
Adult carcass	67 ± 3	4 of 4	0.30	Down
Larval CNS	231 ± 14	4 of 4	1.12	None
Larval Salivary gland	159 ± 5	4 of 4	0.77	Down
Larval midgut	56 ± 2	4 of 4	0.27	Down
Larval tubule	23 ± 2	4 of 4	0.10	Down
Larval hindgut	81 ± 8	4 of 4	0.40	Down
Larval fat body	49 ± 3	4 of 4	0.20	Down
Larval trachea	260 ± 35	4 of 4	1.26	Up
Larval carcass	133 ± 30	4 of 4	0.65	None
S2 cells (growing)	177 ± 5	4 of 4	0.86	None
Whole fly	206 ± 10	4 of 4

Looking for FBgn0039233. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720