FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039270 through 18771 annotations produced 1 hits

(CG11820):

Annotation Number : CG11820
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039270
Gbrowse : chr3R:20891525-20892440 (+) // 100.0 //
Probeset : 1632512_at
Accessions : protein= NP_651331;, nucleotide= NM_143074;
Pathway : via spliceosome // inferred by curator"
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferre
FlyMine data for FBgn0039270.
BioGrid reports that CG11820 interacts with CG2560 .
VDRC has 3 RNAi stocks for FBgn0039270 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	113 ± 5	4 of 4	1.00	None
Head	83 ± 6	4 of 4	0.80	None
Eye	146 ± 5	4 of 4	1.35	Up
Thoracicoabdominal ganglion	103 ± 4	4 of 4	1.00	None
Salivary gland	161 ± 8	4 of 4	1.48	Up
Crop	87 ± 5	4 of 4	0.80	None
Midgut	96 ± 5	4 of 4	0.90	None
Tubule	50 ± 4	3 of 4	0.50	Down
Hindgut	72 ± 3	4 of 4	0.70	Down
Heart	78 ± 5	4 of 4	0.72	Down
Fat body	58 ± 4	4 of 4	0.54	Down
Ovary	194 ± 1	4 of 4	1.80	Up
Testis	66 ± 7	4 of 4	0.60	Down
Male accessory glands	81 ± 1	4 of 4	0.70	None
Virgin spermatheca	34 ± 0	4 of 4	0.31	Down
Mated spermatheca	38 ± 2	4 of 4	0.35	Down
Adult carcass	55 ± 3	4 of 4	0.50	Down
Larval CNS	166 ± 15	4 of 4	1.53	Up
Larval Salivary gland	93 ± 3	4 of 4	0.85	None
Larval midgut	60 ± 5	4 of 4	0.56	Down
Larval tubule	84 ± 5	4 of 4	0.80	None
Larval hindgut	64 ± 0	4 of 4	0.59	Down
Larval fat body	111 ± 3	4 of 4	1.00	None
Larval trachea	112 ± 7	4 of 4	1.04	None
Larval carcass	78 ± 2	4 of 4	0.72	Down
S2 cells (growing)	77 ± 2	4 of 4	0.71	Down
Whole fly	108 ± 9	4 of 4

Looking for FBgn0039270. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720