FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039300 through 18771 annotations produced 1 hits

Ribosomal protein S27 (RpS27):

Annotation Number : CG10423
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039300
Gbrowse : chr3R:21071673-21073222 (-) // 100.0 //
Probeset : 1631296_at
Accessions : protein= NP_651359;, nucleotide= NM_143102;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0039300.
BDGP gene expression has embryonic in situ data for CG10423: 4 pix of staining in 1 body parts.
BioGrid reports that CG10423 interacts with CG10488 CG11001 CG11121 CG11354 CG11427 CG14044 CG31708 CG3289 CG4476 CG5017 CG5662 CG5700 CG7417 CG7885 .
TRiP has 1 RNAi stocks for FBgn0039300 available for purchase.
VDRC has 1 RNAi stocks for FBgn0039300 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2473 ± 64	4 of 4	0.70	Down
Head	3944 ± 200	4 of 4	1.10	None
Eye	5354 ± 87	4 of 4	1.53	Up
Thoracicoabdominal ganglion	3526 ± 105	4 of 4	1.00	None
Salivary gland	8589 ± 291	4 of 4	2.46	Up
Crop	5421 ± 281	4 of 4	1.60	Up
Midgut	4880 ± 166	4 of 4	1.40	Up
Tubule	4655 ± 81	4 of 4	1.30	Up
Hindgut	4456 ± 52	4 of 4	1.30	Up
Heart	5899 ± 379	4 of 4	1.69	Up
Fat body	5076 ± 585	4 of 4	1.45	Up
Ovary	3067 ± 55	4 of 4	0.90	None
Testis	1110 ± 43	4 of 4	0.30	Down
Male accessory glands	7448 ± 308	4 of 4	2.10	Up
Virgin spermatheca	5577 ± 236	4 of 4	1.60	Up
Mated spermatheca	5866 ± 173	4 of 4	1.68	Up
Adult carcass	4918 ± 240	4 of 4	1.40	Up
Larval CNS	2551 ± 186	4 of 4	0.73	Down
Larval Salivary gland	6969 ± 280	4 of 4	1.99	Up
Larval midgut	3905 ± 61	4 of 4	1.12	None
Larval tubule	4194 ± 62	4 of 4	1.20	Up
Larval hindgut	3922 ± 31	4 of 4	1.12	None
Larval fat body	6787 ± 726	4 of 4	1.90	Up
Larval trachea	5571 ± 181	4 of 4	1.59	Up
Larval carcass	4426 ± 321	4 of 4	1.27	None
S2 cells (growing)	4156 ± 61	4 of 4	1.19	Up
Whole fly	3496 ± 174	4 of 4

Looking for FBgn0039300. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720