FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039348 through 18771 annotations produced 1 hits

(CG4673):

Annotation Number : CG4673
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039348
Gbrowse : chr3R:21436775-21450382 (-) // 100.0 //
Probeset : 1634243_a_at
Accessions : protein= NP_001163730; /// NP_001163731; /// NP_651407; /// NP_733110;, nucleotide= NM_001170259; /// NM_001170260; /// NM_143150; /// NM_170231;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from sequence or
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0039348.
BioGrid reports that CG4673 interacts with CG6233 CG6147 CG7196 .
VDRC has 2 RNAi stocks for FBgn0039348 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	134 ± 2	4 of 4	0.10	Down
Head	341 ± 20	4 of 4	0.30	Down
Eye	152 ± 7	4 of 4	0.14	Down
Thoracicoabdominal ganglion	173 ± 21	4 of 4	0.20	Down
Salivary gland	199 ± 30	4 of 4	0.18	Down
Crop	249 ± 7	4 of 4	0.20	Down
Midgut	130 ± 6	4 of 4	0.10	Down
Tubule	225 ± 10	4 of 4	0.20	Down
Hindgut	204 ± 10	4 of 4	0.20	Down
Heart	419 ± 18	4 of 4	0.38	Down
Fat body	194 ± 8	4 of 4	0.18	Down
Ovary	418 ± 5	4 of 4	0.40	Down
Testis	512 ± 5	4 of 4	0.50	Down
Male accessory glands	230 ± 6	4 of 4	0.20	Down
Virgin spermatheca	216 ± 6	4 of 4	0.20	Down
Mated spermatheca	205 ± 3	4 of 4	0.19	Down
Adult carcass	3091 ± 41	4 of 4	2.80	Up
Larval CNS	336 ± 15	4 of 4	0.31	Down
Larval Salivary gland	332 ± 15	4 of 4	0.30	Down
Larval midgut	164 ± 19	4 of 4	0.15	Down
Larval tubule	404 ± 17	4 of 4	0.40	Down
Larval hindgut	224 ± 13	4 of 4	0.20	Down
Larval fat body	238 ± 15	4 of 4	0.20	Down
Larval trachea	258 ± 17	4 of 4	0.23	Down
Larval carcass	346 ± 36	4 of 4	0.31	Down
S2 cells (growing)	221 ± 4	4 of 4	0.20	Down
Whole fly	1102 ± 95	4 of 4

Looking for FBgn0039348. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720