FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039354 through 18771 annotations produced 1 hits

Lgr3 (Lgr3):

Annotation Number : CG31096
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039354
Gbrowse : chr3R:21491530-21502938 (+) // 100.0 //
Probeset : 1641176_at
Accessions : protein= NP_733115;, nucleotide= NM_170236;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0039354.
BDGP gene expression has embryonic in situ data for Lgr3: 4 pix of staining in 1 body parts.
Homophila reports that CG31096 is a close match (7e-11) to human gene LRRC8;KIAA1437 (NP_062540), a gene associated with Agammaglobulinemia, non-Bruton type, 601495 (3).
TRiP has 2 RNAi stocks for FBgn0039354 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	37 ± 2	4 of 4	12.40	Up
Head	9 ± 0	2 of 4	3.20	Up
Eye	2 ± 1	0 of 4	0.97	None
Thoracicoabdominal ganglion	19 ± 1	4 of 4	6.30	Up
Salivary gland	13 ± 1	2 of 4	4.43	Up
Crop	2 ± 1	0 of 4	0.80	None
Midgut	7 ± 2	0 of 4	2.60	None
Tubule	6 ± 0	0 of 4	2.00	Up
Hindgut	8 ± 2	3 of 4	2.90	None
Heart	3 ± 1	0 of 4	1.05	None
Fat body	4 ± 4	0 of 4	1.53	None
Ovary	6 ± 1	1 of 4	2.00	None
Testis	5 ± 0	0 of 4	1.90	None
Male accessory glands	4 ± 2	0 of 4	1.40	None
Virgin spermatheca	3 ± 1	0 of 4	1.11	None
Mated spermatheca	3 ± 1	0 of 4	1.07	None
Adult carcass	15 ± 4	1 of 4	5.20	None
Larval CNS	36 ± 0	4 of 4	11.96	Up
Larval Salivary gland	6 ± 2	0 of 4	2.11	None
Larval midgut	10 ± 3	0 of 4	3.38	None
Larval tubule	9 ± 2	2 of 4	3.20	Up
Larval hindgut	6 ± 0	1 of 4	2.21	Up
Larval fat body	8 ± 1	3 of 4	2.90	Up
Larval trachea	4 ± 2	1 of 4	1.50	None
Larval carcass	36 ± 13	4 of 4	11.90	None
S2 cells (growing)	4 ± 0	0 of 4	1.50	None
Whole fly	3 ± 0	0 of 4

Looking for FBgn0039354. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720