FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039396 through 18771 annotations produced 2 hits

Cardioacceleratory peptide receptor (CcapR):

Annotation Number : CG14547
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039396
Gbrowse : chr3R:21766951-21767347 (-) // 100.0 //
Probeset : 1625101_at
Accessions : protein= NP_001163742; /// NP_996297;, nucleotide= NM_001170271; /// NM_206574;
Pathway : chitin-based cuticle // traceable author statement"
Interpro : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred
FlyMine data for FBgn0039396.
TRiP has 1 RNAi stocks for FBgn0039396 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039396 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 0	1 of 4	3.20	None
Head	1 ± 1	0 of 4	0.90	None
Eye	1 ± 0	0 of 4	0.52	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	2.00	None
Salivary gland	3 ± 2	0 of 4	1.78	None
Crop	6 ± 0	0 of 4	2.80	Up
Midgut	7 ± 3	1 of 4	3.20	None
Tubule	2 ± 0	0 of 4	1.00	None
Hindgut	3 ± 1	0 of 4	1.40	None
Heart	5 ± 1	2 of 4	2.53	None
Fat body	9 ± 5	0 of 4	4.14	None
Ovary	1 ± 0	0 of 4	0.70	None
Testis	0 ± 0	0 of 4	0.30	None
Male accessory glands	1 ± 0	0 of 4	0.80	None
Virgin spermatheca	3 ± 1	0 of 4	1.72	None
Mated spermatheca	4 ± 3	0 of 4	1.97	None
Adult carcass	6 ± 3	0 of 4	3.10	None
Larval CNS	7 ± 1	3 of 4	3.67	Up
Larval Salivary gland	10 ± 2	0 of 4	4.60	Up
Larval midgut	1 ± 0	0 of 4	0.59	None
Larval tubule	2 ± 0	0 of 4	1.00	None
Larval hindgut	3 ± 1	0 of 4	1.74	None
Larval fat body	8 ± 2	0 of 4	3.80	None
Larval trachea	3 ± 3	0 of 4	1.69	None
Larval carcass	4 ± 1	0 of 4	1.91	None
S2 cells (growing)	1 ± 0	0 of 4	0.54	None
Whole fly	2 ± 0	0 of 4

Cardioacceleratory peptide receptor (CcapR):

Annotation Number : CG6111
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039396
Gbrowse : chr3R:21749976-21751664 (-) // 100.0 //
Probeset : 1639871_at
Accessions : protein= NP_001163742; /// NP_996297;, nucleotide= NM_001170271; /// NM_206574;
Pathway : chitin-based cuticle // traceable author statement"
Interpro : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred
FlyMine data for FBgn0039396.
TRiP has 1 RNAi stocks for FBgn0039396 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039396 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	19 ± 1	4 of 4	2.20	Up
Head	12 ± 1	4 of 4	1.50	None
Eye	3 ± 0	0 of 4	0.38	None
Thoracicoabdominal ganglion	24 ± 5	4 of 4	2.70	None
Salivary gland	22 ± 7	0 of 4	2.56	None
Crop	12 ± 1	2 of 4	1.40	None
Midgut	13 ± 2	0 of 4	1.60	None
Tubule	7 ± 0	0 of 4	0.80	Down
Hindgut	14 ± 1	2 of 4	1.60	None
Heart	6 ± 0	0 of 4	0.79	None
Fat body	19 ± 4	4 of 4	2.24	Up
Ovary	7 ± 0	1 of 4	0.90	None
Testis	8 ± 1	2 of 4	0.90	None
Male accessory glands	15 ± 1	2 of 4	1.80	Up
Virgin spermatheca	13 ± 1	3 of 4	1.54	None
Mated spermatheca	13 ± 2	1 of 4	1.47	None
Adult carcass	19 ± 4	1 of 4	2.20	None
Larval CNS	21 ± 3	4 of 4	2.39	Up
Larval Salivary gland	12 ± 1	1 of 4	1.45	None
Larval midgut	7 ± 2	0 of 4	0.87	None
Larval tubule	9 ± 0	0 of 4	1.00	None
Larval hindgut	4 ± 1	0 of 4	0.52	None
Larval fat body	17 ± 1	3 of 4	2.00	Up
Larval trachea	6 ± 4	0 of 4	0.75	None
Larval carcass	10 ± 1	0 of 4	1.17	None
S2 cells (growing)	12 ± 0	4 of 4	1.46	None
Whole fly	8 ± 1	1 of 4

Looking for FBgn0039396. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720