FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039424 through 18771 annotations produced 2 hits

/// Ribosomal protein L36A (CG14239 /// RpL36A):

Annotation Number : Stencil:3R:22221155:22218090:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039424
Gbrowse : chr3R:22228725-22230591 (-) // 98.91 //
Probeset : 1641656_at
Accessions : protein= NP_001097937;, nucleotide= NM_001104467;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic anno
Interpro : 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005216 // ion channel activity
FlyMine data for FBgn0039424.
TRiP has 1 RNAi stocks for FBgn0039424 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039424 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	3 of 4	0.80	None
Head	10 ± 1	4 of 4	1.40	None
Eye	5 ± 0	0 of 4	0.69	Down
Thoracicoabdominal ganglion	6 ± 1	1 of 4	0.80	None
Salivary gland	14 ± 6	0 of 4	1.92	None
Crop	8 ± 1	2 of 4	1.10	None
Midgut	9 ± 3	1 of 4	1.20	None
Tubule	7 ± 0	1 of 4	0.90	None
Hindgut	12 ± 1	4 of 4	1.60	None
Heart	4 ± 0	0 of 4	0.60	Down
Fat body	18 ± 4	4 of 4	2.46	Up
Ovary	5 ± 0	1 of 4	0.70	None
Testis	6 ± 0	2 of 4	0.90	None
Male accessory glands	6 ± 2	1 of 4	0.80	None
Virgin spermatheca	12 ± 1	2 of 4	1.68	None
Mated spermatheca	13 ± 2	2 of 4	1.79	None
Adult carcass	9 ± 1	0 of 4	1.20	None
Larval CNS	7 ± 1	3 of 4	0.92	None
Larval Salivary gland	6 ± 1	0 of 4	0.86	None
Larval midgut	11 ± 1	1 of 4	1.44	Up
Larval tubule	7 ± 2	1 of 4	1.00	None
Larval hindgut	14 ± 0	4 of 4	1.82	Up
Larval fat body	9 ± 2	0 of 4	1.30	None
Larval trachea	2 ± 2	0 of 4	0.33	Down
Larval carcass	7 ± 1	2 of 4	1.03	None
S2 cells (growing)	5 ± 0	0 of 4	0.75	Down
Whole fly	7 ± 0	1 of 4

(CG14239):

Annotation Number : CG14239
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039424
Gbrowse : chr3R:22227630-22228510 (-) // 100.0 //
Probeset : 1639572_at
Accessions : protein= NP_001097937;, nucleotide= NM_001104467;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005216 // ion channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferre
FlyMine data for FBgn0039424.
TRiP has 1 RNAi stocks for FBgn0039424 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039424 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.50	None
Head	0 ± 0	0 of 4	0.30	None
Eye	1 ± 0	0 of 4	0.41	None
Thoracicoabdominal ganglion	5 ± 1	1 of 4	2.10	None
Salivary gland	3 ± 1	0 of 4	1.35	None
Crop	0 ± 0	0 of 4	0.20	None
Midgut	1 ± 1	0 of 4	0.80	None
Tubule	1 ± 0	0 of 4	0.70	None
Hindgut	2 ± 1	0 of 4	1.00	None
Heart	1 ± 0	0 of 4	0.53	None
Fat body	3 ± 2	0 of 4	1.36	None
Ovary	1 ± 0	0 of 4	0.40	None
Testis	1 ± 0	0 of 4	0.70	None
Male accessory glands	1 ± 0	0 of 4	0.40	None
Virgin spermatheca	1 ± 0	0 of 4	0.59	None
Mated spermatheca	0 ± 0	0 of 4	0.23	None
Adult carcass	0 ± 0	0 of 4	0.30	None
Larval CNS	2 ± 2	0 of 4	0.92	None
Larval Salivary gland	3 ± 1	0 of 4	1.32	None
Larval midgut	1 ± 0	0 of 4	0.57	None
Larval tubule	1 ± 0	0 of 4	0.60	None
Larval hindgut	0 ± 0	0 of 4	0.32	None
Larval fat body	1 ± 0	0 of 4	0.60	None
Larval trachea	4 ± 2	0 of 4	1.69	None
Larval carcass	0 ± 0	0 of 4	0.36	None
S2 cells (growing)	3 ± 1	0 of 4	1.38	None
Whole fly	2 ± 0	0 of 4

Looking for FBgn0039424. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720