FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039427 through 18771 annotations produced 1 hits

(CG5447):

Annotation Number : CG5447
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039427
Gbrowse : chr3R:22278254-22280311 (+) // 100.0 //
Probeset : 1632332_at
Accessions : protein= NP_651478;, nucleotide= NM_143221;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0039427.
BDGP gene expression has embryonic in situ data for CG5447: 8 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0039427 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	175 ± 10	4 of 4	1.20	None
Head	98 ± 5	4 of 4	0.70	Down
Eye	125 ± 7	4 of 4	0.88	None
Thoracicoabdominal ganglion	147 ± 7	4 of 4	1.00	None
Salivary gland	142 ± 7	4 of 4	1.00	None
Crop	157 ± 3	4 of 4	1.10	None
Midgut	315 ± 14	4 of 4	2.20	Up
Tubule	197 ± 3	4 of 4	1.40	Up
Hindgut	180 ± 2	4 of 4	1.30	Up
Heart	96 ± 7	4 of 4	0.68	Down
Fat body	135 ± 8	4 of 4	0.95	None
Ovary	304 ± 6	4 of 4	2.10	Up
Testis	68 ± 3	4 of 4	0.50	Down
Male accessory glands	120 ± 5	4 of 4	0.80	None
Virgin spermatheca	163 ± 5	4 of 4	1.14	None
Mated spermatheca	169 ± 9	4 of 4	1.19	None
Adult carcass	70 ± 6	4 of 4	0.50	Down
Larval CNS	306 ± 27	4 of 4	2.15	Up
Larval Salivary gland	241 ± 13	4 of 4	1.69	Up
Larval midgut	350 ± 39	4 of 4	2.46	Up
Larval tubule	226 ± 9	4 of 4	1.60	Up
Larval hindgut	241 ± 4	4 of 4	1.70	Up
Larval fat body	191 ± 11	4 of 4	1.30	Up
Larval trachea	141 ± 15	4 of 4	0.99	None
Larval carcass	161 ± 5	4 of 4	1.13	None
S2 cells (growing)	249 ± 6	4 of 4	1.75	Up
Whole fly	142 ± 8	4 of 4

Looking for FBgn0039427. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720