FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039459 through 18771 annotations produced 1 hits

(CG5491):

Annotation Number : CG5491
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039459
Gbrowse : chr3R:22689119-22690289 (+) // 100.0 //
Probeset : 1632206_at
Accessions : protein= NP_651507;, nucleotide= NM_143250;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0039459.
BDGP gene expression has embryonic in situ data for CG5491: 12 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0039459 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039459 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 0	4 of 4	0.30	Down
Head	16 ± 1	2 of 4	0.20	Down
Eye	15 ± 1	4 of 4	0.23	Down
Thoracicoabdominal ganglion	19 ± 3	3 of 4	0.30	Down
Salivary gland	54 ± 4	4 of 4	0.82	None
Crop	18 ± 2	2 of 4	0.30	Down
Midgut	19 ± 3	1 of 4	0.30	Down
Tubule	18 ± 1	1 of 4	0.30	Down
Hindgut	17 ± 1	4 of 4	0.30	Down
Heart	14 ± 1	4 of 4	0.22	Down
Fat body	20 ± 5	3 of 4	0.31	Down
Ovary	124 ± 4	4 of 4	1.90	Up
Testis	3 ± 1	0 of 4	0.00	Down
Male accessory glands	34 ± 4	4 of 4	0.50	Down
Virgin spermatheca	20 ± 1	1 of 4	0.31	Down
Mated spermatheca	26 ± 1	1 of 4	0.40	Down
Adult carcass	23 ± 4	2 of 4	0.30	Down
Larval CNS	31 ± 2	4 of 4	0.47	Down
Larval Salivary gland	35 ± 2	2 of 4	0.54	Down
Larval midgut	27 ± 1	4 of 4	0.42	Down
Larval tubule	17 ± 0	3 of 4	0.30	Down
Larval hindgut	20 ± 1	4 of 4	0.31	Down
Larval fat body	13 ± 4	0 of 4	0.20	Down
Larval trachea	32 ± 6	4 of 4	0.49	Down
Larval carcass	21 ± 1	4 of 4	0.32	Down
S2 cells (growing)	41 ± 1	4 of 4	0.62	Down
Whole fly	66 ± 3	4 of 4

Looking for FBgn0039459. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720