Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0039465 through 18771 annotations produced 1 hits



Tetraspanin 97E (Tsp97E):

Annotation Number : CG6323
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039465
Gbrowse : chr3R:22787445-22790547 (-) // 100.0 //
Probeset : 1625640_a_at
Accessions : protein= NP_001138115; /// NP_524524; /// NP_733176;, nucleotide= NM_001144643; /// NM_079800; /// NM_170297;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0039465.
BDGP gene expression has embryonic in situ data for Tsp97E: 4 pix of staining in 1 body parts.
BioGrid reports that CG6323 interacts with CG8277 .
TRiP has 1 RNAi stocks for FBgn0039465 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039465 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain837 ± 164 of 4 2.80Up
Head489 ± 504 of 4 1.60Up
Eye600 ± 414 of 4 2.00Up
Thoracicoabdominal ganglion684 ± 294 of 4 2.30Up
Salivary gland152 ± 114 of 4 0.51Down
Crop131 ± 14 of 4 0.40Down
Midgut89 ± 24 of 4 0.30Down
Tubule51 ± 44 of 4 0.20Down
Hindgut87 ± 24 of 4 0.30Down
Heart340 ± 34 of 4 1.13None
Fat body551 ± 314 of 4 1.84Up
Ovary721 ± 154 of 4 2.40Up
Testis49 ± 34 of 4 0.20Down
Male accessory glands49 ± 24 of 4 0.20Down
Virgin spermatheca432 ± 294 of 4 1.44Up
Mated spermatheca374 ± 274 of 4 1.25None
Adult carcass216 ± 84 of 4 0.70Down
Larval CNS712 ± 374 of 4 2.37Up
Larval Salivary gland47 ± 04 of 4 0.16Down
Larval midgut88 ± 44 of 4 0.29Down
Larval tubule110 ± 74 of 4 0.40Down
Larval hindgut110 ± 34 of 4 0.37Down
Larval fat body514 ± 634 of 4 1.70Up
Larval trachea221 ± 104 of 4 0.74None
Larval carcass130 ± 114 of 4 0.43Down
S2 cells (growing)169 ± 54 of 4 0.56Down
Whole fly300 ± 264 of 4

Looking for FBgn0039465. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime