FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039476 through 18771 annotations produced 2 hits

/// (CG6271 /// CG6277):

Annotation Number : CG6277
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039475 /// FBgn0039476
Gbrowse : chr3R:22847790-22848934 (-) // 100.0 //
Probeset : 1623027_s_at
Accessions : protein= NP_651525; /// NP_651526;, nucleotide= NM_143268; /// NM_143269;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004806 // triglyceride lipase activity // infe
FlyMine data for FBgn0039475 /// FBgn0039476.
Homophila reports that CG6277 is a close match (1e-28) to human gene HDLCQ12;HL;LIPC;LIPH (NP_000227), a gene associated with Hepatic lipase deficiency (3);[High density lipoprotein cholesterol level QTL 12] (3);{Diabetes mellitus, noninsulin-dependent}, 125853 (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.00	None
Head	2 ± 1	0 of 4	0.00	None
Eye	3 ± 1	0 of 4	0.03	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.00	None
Salivary gland	1 ± 0	0 of 4	0.02	None
Crop	0 ± 0	0 of 4	0.00	None
Midgut	2923 ± 168	4 of 4	28.20	Up
Tubule	1 ± 0	0 of 4	0.00	Down
Hindgut	4 ± 2	0 of 4	0.00	None
Heart	1 ± 0	0 of 4	0.02	None
Fat body	2 ± 2	0 of 4	0.03	None
Ovary	0 ± 0	0 of 4	0.00	None
Testis	0 ± 0	0 of 4	0.00	None
Male accessory glands	1 ± 0	0 of 4	0.00	None
Virgin spermatheca	1 ± 0	0 of 4	0.01	None
Mated spermatheca	0 ± 0	0 of 4	0.01	None
Adult carcass	2 ± 0	0 of 4	0.00	None
Larval CNS	0 ± 0	0 of 4	0.01	None
Larval Salivary gland	1 ± 0	0 of 4	0.02	None
Larval midgut	601 ± 352	4 of 4	5.81	None
Larval tubule	0 ± 0	0 of 4	0.00	None
Larval hindgut	1 ± 0	0 of 4	0.01	None
Larval fat body	2 ± 0	0 of 4	0.00	None
Larval trachea	0 ± 0	0 of 4	0.00	None
Larval carcass	0 ± 0	0 of 4	0.01	None
S2 cells (growing)	0 ± 0	0 of 4	0.01	None
Whole fly	103 ± 47	4 of 4

(CG6271):

Annotation Number : CG6271
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039476
Gbrowse : chr3R:22850682-22851822 (-) // 100.0 //
Probeset : 1635045_at
Accessions : protein= NP_651526;, nucleotide= NM_143269;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004806 // triglyceride lipase activity // infe
FlyMine data for FBgn0039476.
BDGP gene expression has embryonic in situ data for CG6271: 4 pix of staining in 1 body parts.
Homophila reports that CG6271 is a close match (7e-28) to human gene HDLCQ12;HL;LIPC;LIPH (NP_000227), a gene associated with Hepatic lipase deficiency (3);[High density lipoprotein cholesterol level QTL 12] (3);{Diabetes mellitus, noninsulin-dependent}, 125853 (3).
VDRC has 2 RNAi stocks for FBgn0039476 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.50	None
Head	4 ± 1	0 of 4	0.60	None
Eye	3 ± 2	1 of 4	0.43	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.50	None
Salivary gland	10 ± 2	0 of 4	1.43	None
Crop	5 ± 1	0 of 4	0.70	None
Midgut	152 ± 19	4 of 4	21.20	Up
Tubule	5 ± 1	0 of 4	0.80	None
Hindgut	8 ± 2	0 of 4	1.20	None
Heart	3 ± 1	0 of 4	0.42	None
Fat body	4 ± 2	0 of 4	0.64	None
Ovary	3 ± 1	0 of 4	0.50	None
Testis	4 ± 1	0 of 4	0.60	None
Male accessory glands	5 ± 2	0 of 4	0.80	None
Virgin spermatheca	2 ± 0	0 of 4	0.28	None
Mated spermatheca	3 ± 1	0 of 4	0.54	None
Adult carcass	5 ± 3	0 of 4	0.80	None
Larval CNS	1 ± 1	0 of 4	0.18	None
Larval Salivary gland	4 ± 1	0 of 4	0.66	None
Larval midgut	61 ± 17	3 of 4	8.55	None
Larval tubule	4 ± 2	0 of 4	0.60	None
Larval hindgut	6 ± 1	1 of 4	0.83	None
Larval fat body	11 ± 3	0 of 4	1.60	None
Larval trachea	3 ± 3	0 of 4	0.53	None
Larval carcass	4 ± 1	0 of 4	0.62	None
S2 cells (growing)	3 ± 0	0 of 4	0.46	None
Whole fly	7 ± 2	0 of 4

Looking for FBgn0039476. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720