FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039544 through 18771 annotations produced 1 hits

(CG12877):

Annotation Number : CG12877
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039544
Gbrowse : chr3R:23532823-23536415 (+) // 100.0 //
Probeset : 1628011_a_at
Accessions : protein= NP_001034073; /// NP_733234;, nucleotide= NM_001038984; /// NM_170355;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred f
FlyMine data for FBgn0039544.
BDGP gene expression has embryonic in situ data for CG12877: 4 pix of staining in 1 body parts.
BioGrid reports that CG12877 interacts with CG17592 CG5680 CG7260 CG9642 CG17769 CG2258 CG3918 CG6569 CG6607 CG9184 .
TRiP has 1 RNAi stocks for FBgn0039544 available for purchase.
VDRC has 1 RNAi stocks for FBgn0039544 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	59 ± 6	4 of 4	1.00	None
Head	39 ± 2	4 of 4	0.60	None
Eye	64 ± 6	4 of 4	1.05	None
Thoracicoabdominal ganglion	53 ± 2	4 of 4	0.90	None
Salivary gland	59 ± 5	4 of 4	0.97	None
Crop	44 ± 1	4 of 4	0.70	None
Midgut	48 ± 1	4 of 4	0.80	None
Tubule	100 ± 12	4 of 4	1.60	Up
Hindgut	58 ± 3	4 of 4	1.00	None
Heart	24 ± 2	4 of 4	0.39	None
Fat body	18 ± 2	3 of 4	0.30	None
Ovary	198 ± 4	4 of 4	3.20	Up
Testis	43 ± 2	4 of 4	0.70	None
Male accessory glands	27 ± 5	3 of 4	0.40	None
Virgin spermatheca	18 ± 1	3 of 4	0.29	None
Mated spermatheca	19 ± 2	3 of 4	0.31	None
Adult carcass	36 ± 5	3 of 4	0.60	None
Larval CNS	81 ± 8	4 of 4	1.32	None
Larval Salivary gland	37 ± 3	4 of 4	0.60	None
Larval midgut	82 ± 11	4 of 4	1.34	None
Larval tubule	128 ± 3	4 of 4	2.10	Up
Larval hindgut	86 ± 6	4 of 4	1.40	None
Larval fat body	23 ± 2	3 of 4	0.40	None
Larval trachea	68 ± 6	4 of 4	1.11	None
Larval carcass	39 ± 2	4 of 4	0.64	None
S2 cells (growing)	102 ± 9	4 of 4	1.66	None
Whole fly	61 ± 16	4 of 4

Looking for FBgn0039544. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720