FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039584 through 18771 annotations produced 2 hits

beat-VI (beat-VI):

Annotation Number : S.C3R003252
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039584
Gbrowse : chr3R:24263935-24273408 (+) // 100.0 //
Probeset : 1626567_at
Accessions : protein= NP_651619;, nucleotide= NM_143362;
Pathway : 0005576 // extracellular region // non-traceable author statement /// 0016020 // membrane // inferred from electronic an
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0039584.
VDRC has 5 RNAi stocks for FBgn0039584 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	0 of 4	1.80	Up
Head	4 ± 1	0 of 4	1.40	None
Eye	3 ± 1	0 of 4	0.96	None
Thoracicoabdominal ganglion	8 ± 0	0 of 4	2.50	Up
Salivary gland	8 ± 3	0 of 4	2.43	None
Crop	4 ± 2	0 of 4	1.40	None
Midgut	5 ± 2	0 of 4	1.70	None
Tubule	2 ± 0	0 of 4	0.80	None
Hindgut	1 ± 0	0 of 4	0.50	None
Heart	0 ± 0	0 of 4	0.21	None
Fat body	2 ± 1	0 of 4	0.76	None
Ovary	1 ± 0	0 of 4	0.30	None
Testis	1 ± 0	0 of 4	0.30	None
Male accessory glands	8 ± 2	0 of 4	2.40	None
Virgin spermatheca	6 ± 1	0 of 4	1.80	None
Mated spermatheca	6 ± 1	0 of 4	1.82	None
Adult carcass	6 ± 2	0 of 4	2.00	None
Larval CNS	4 ± 3	0 of 4	1.39	None
Larval Salivary gland	2 ± 1	0 of 4	0.86	None
Larval midgut	5 ± 1	0 of 4	1.50	None
Larval tubule	4 ± 1	0 of 4	1.30	None
Larval hindgut	2 ± 0	0 of 4	0.63	None
Larval fat body	4 ± 2	0 of 4	1.40	None
Larval trachea	3 ± 1	0 of 4	1.01	None
Larval carcass	4 ± 0	0 of 4	1.46	None
S2 cells (growing)	2 ± 1	0 of 4	0.84	None
Whole fly	3 ± 1	0 of 4

beat-VI (beat-VI):

Annotation Number : CG14064
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039584
Gbrowse : chr3R:24243925-24298931 (+) // 100.0 //
Probeset : 1641248_at
Accessions : protein= NP_651619;, nucleotide= NM_143362;
Pathway : 0005576 // extracellular region // non-traceable author statement /// 0016020 // membrane // inferred from electronic an
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0039584.
VDRC has 5 RNAi stocks for FBgn0039584 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	193 ± 5	4 of 4	73.60	Up
Head	24 ± 2	4 of 4	9.20	Up
Eye	14 ± 1	3 of 4	5.49	Up
Thoracicoabdominal ganglion	217 ± 7	4 of 4	82.80	Up
Salivary gland	6 ± 4	0 of 4	2.38	None
Crop	1 ± 0	0 of 4	0.50	None
Midgut	3 ± 1	0 of 4	1.20	None
Tubule	2 ± 0	0 of 4	0.80	None
Hindgut	1 ± 0	0 of 4	0.40	None
Heart	1 ± 0	0 of 4	0.70	None
Fat body	1 ± 0	0 of 4	0.45	None
Ovary	0 ± 0	0 of 4	0.20	None
Testis	1 ± 0	0 of 4	0.40	None
Male accessory glands	1 ± 0	0 of 4	0.50	None
Virgin spermatheca	4 ± 1	0 of 4	1.72	None
Mated spermatheca	5 ± 3	0 of 4	1.97	None
Adult carcass	1 ± 0	0 of 4	0.70	None
Larval CNS	99 ± 12	4 of 4	37.96	Up
Larval Salivary gland	1 ± 0	0 of 4	0.64	None
Larval midgut	1 ± 0	0 of 4	0.62	None
Larval tubule	1 ± 0	0 of 4	0.50	None
Larval hindgut	0 ± 0	0 of 4	0.18	None
Larval fat body	1 ± 0	0 of 4	0.50	None
Larval trachea	0 ± 0	0 of 4	0.22	None
Larval carcass	1 ± 0	0 of 4	0.45	None
S2 cells (growing)	1 ± 0	0 of 4	0.40	None
Whole fly	2 ± 1	0 of 4

Looking for FBgn0039584. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720