FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039626 through 18771 annotations produced 1 hits

CG1420 (Slu7):

Annotation Number : CG1420
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039626
Gbrowse : chr3R:24862775-24864788 (-) // 99.73 //
Probeset : 1624639_at
Accessions : protein= NP_651659;, nucleotide= NM_143402;
Pathway : via spliceosome // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from elec
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from sequence
FlyMine data for FBgn0039626.
BDGP gene expression has embryonic in situ data for CG1420: 4 pix of staining in 1 body parts.
BioGrid reports that CG1420 interacts with CG3294 .
VDRC has 2 RNAi stocks for FBgn0039626 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	84 ± 1	4 of 4	1.20	Up
Head	53 ± 4	4 of 4	0.80	None
Eye	48 ± 3	4 of 4	0.72	Down
Thoracicoabdominal ganglion	60 ± 2	4 of 4	0.90	None
Salivary gland	62 ± 4	3 of 4	0.92	None
Crop	76 ± 3	4 of 4	1.10	None
Midgut	46 ± 2	4 of 4	0.70	Down
Tubule	75 ± 4	4 of 4	1.10	None
Hindgut	59 ± 3	4 of 4	0.90	None
Heart	35 ± 2	4 of 4	0.52	Down
Fat body	44 ± 5	2 of 4	0.66	Down
Ovary	111 ± 4	4 of 4	1.60	Up
Testis	48 ± 3	4 of 4	0.70	Down
Male accessory glands	63 ± 3	4 of 4	0.90	None
Virgin spermatheca	66 ± 5	4 of 4	0.98	None
Mated spermatheca	64 ± 4	4 of 4	0.96	None
Adult carcass	37 ± 4	2 of 4	0.60	Down
Larval CNS	111 ± 6	4 of 4	1.65	Up
Larval Salivary gland	74 ± 3	4 of 4	1.09	None
Larval midgut	36 ± 5	2 of 4	0.54	Down
Larval tubule	55 ± 1	4 of 4	0.80	None
Larval hindgut	56 ± 1	4 of 4	0.83	None
Larval fat body	52 ± 2	4 of 4	0.80	None
Larval trachea	53 ± 2	4 of 4	0.78	None
Larval carcass	43 ± 1	4 of 4	0.64	Down
S2 cells (growing)	96 ± 2	4 of 4	1.42	Up
Whole fly	67 ± 5	4 of 4

Looking for FBgn0039626. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720