FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039627 through 18771 annotations produced 1 hits

chr3R:24875232-24876443 (+) // 100.0 // ():

Annotation Number : CG11837
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1631093_at
Accessions : protein= , nucleotide= NP_651660;
Pathway : 0000154 // rRNA modification // inferred from sequence or structural similarity /// 0000154 // rRNA modification // infe
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotatio
FlyMine data for full length.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	36 ± 2	4 of 4	0.40	Down
Head	50 ± 4	4 of 4	0.50	Down
Eye	26 ± 1	4 of 4	0.29	Down
Thoracicoabdominal ganglion	32 ± 2	4 of 4	0.30	Down
Salivary gland	45 ± 0	4 of 4	0.49	Down
Crop	45 ± 2	4 of 4	0.50	Down
Midgut	39 ± 2	4 of 4	0.40	Down
Tubule	41 ± 5	4 of 4	0.50	Down
Hindgut	29 ± 1	4 of 4	0.30	Down
Heart	27 ± 1	4 of 4	0.30	Down
Fat body	68 ± 7	4 of 4	0.73	Down
Ovary	238 ± 1	4 of 4	2.60	Up
Testis	17 ± 0	4 of 4	0.20	Down
Male accessory glands	65 ± 8	4 of 4	0.70	Down
Virgin spermatheca	51 ± 4	4 of 4	0.56	Down
Mated spermatheca	73 ± 4	4 of 4	0.79	Down
Adult carcass	48 ± 5	4 of 4	0.50	Down
Larval CNS	109 ± 6	4 of 4	1.18	Up
Larval Salivary gland	65 ± 6	4 of 4	0.70	Down
Larval midgut	26 ± 4	4 of 4	0.29	Down
Larval tubule	15 ± 1	3 of 4	0.20	Down
Larval hindgut	42 ± 4	4 of 4	0.45	Down
Larval fat body	20 ± 3	3 of 4	0.20	Down
Larval trachea	90 ± 16	4 of 4	0.97	None
Larval carcass	61 ± 17	4 of 4	0.66	None
S2 cells (growing)	101 ± 5	4 of 4	1.09	None
Whole fly	93 ± 4	4 of 4

Looking for FBgn0039627. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720