FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039642 through 18771 annotations produced 1 hits

(CG11882):

Annotation Number : CG11882
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039642
Gbrowse : chr3R:24972914-24973894 (-) // 100.0 //
Probeset : 1626082_at
Accessions : protein= NP_651676;, nucleotide= NM_143419;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred fr
FlyMine data for FBgn0039642.
BioGrid reports that CG11882 interacts with CG11882 CG5303 CG6421 CG6948 CG9012 .
TRiP has 1 RNAi stocks for FBgn0039642 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039642 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	51 ± 2	4 of 4	0.70	None
Head	39 ± 4	4 of 4	0.60	Down
Eye	63 ± 2	4 of 4	0.92	None
Thoracicoabdominal ganglion	55 ± 3	4 of 4	0.80	None
Salivary gland	45 ± 3	3 of 4	0.65	None
Crop	27 ± 2	4 of 4	0.40	Down
Midgut	25 ± 1	0 of 4	0.40	Down
Tubule	23 ± 1	4 of 4	0.30	Down
Hindgut	27 ± 1	3 of 4	0.40	Down
Heart	38 ± 2	4 of 4	0.56	Down
Fat body	47 ± 7	4 of 4	0.68	None
Ovary	123 ± 12	4 of 4	1.80	Up
Testis	46 ± 7	4 of 4	0.70	None
Male accessory glands	30 ± 2	4 of 4	0.40	Down
Virgin spermatheca	38 ± 4	4 of 4	0.56	Down
Mated spermatheca	45 ± 1	4 of 4	0.66	None
Adult carcass	43 ± 5	3 of 4	0.60	Down
Larval CNS	119 ± 9	4 of 4	1.72	Up
Larval Salivary gland	37 ± 4	2 of 4	0.54	Down
Larval midgut	46 ± 4	4 of 4	0.66	None
Larval tubule	122 ± 5	4 of 4	1.80	Up
Larval hindgut	49 ± 3	4 of 4	0.71	None
Larval fat body	167 ± 23	4 of 4	2.40	Up
Larval trachea	141 ± 10	4 of 4	2.05	Up
Larval carcass	61 ± 5	4 of 4	0.89	None
S2 cells (growing)	102 ± 7	4 of 4	1.48	Up
Whole fly	69 ± 8	4 of 4

Looking for FBgn0039642. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720