FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039680 through 18771 annotations produced 1 hits

CAP-D2 condensin subunit (CAP-D2):

Annotation Number : CG1911
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039680
Gbrowse : chr3R:25501397-25505985 (+) // 100.0 //
Probeset : 1625447_at
Accessions : protein= NP_651709;, nucleotide= NM_143452;
Pathway : 0000796 // condensin complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0039680.
BDGP gene expression has embryonic in situ data for CG1911: 14 pix of staining in 10 body parts.
BioGrid reports that CG1911 interacts with CG2865 .
TRiP has 3 RNAi stocks for FBgn0039680 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039680 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.10	Down
Head	5 ± 2	0 of 4	0.10	Down
Eye	6 ± 1	0 of 4	0.13	Down
Thoracicoabdominal ganglion	6 ± 2	0 of 4	0.10	Down
Salivary gland	15 ± 4	0 of 4	0.28	Down
Crop	5 ± 1	0 of 4	0.10	Down
Midgut	4 ± 0	0 of 4	0.10	Down
Tubule	6 ± 0	0 of 4	0.10	Down
Hindgut	5 ± 1	0 of 4	0.10	Down
Heart	3 ± 1	0 of 4	0.07	Down
Fat body	3 ± 3	0 of 4	0.06	Down
Ovary	150 ± 14	4 of 4	2.80	Up
Testis	7 ± 0	1 of 4	0.10	Down
Male accessory glands	4 ± 2	0 of 4	0.10	Down
Virgin spermatheca	5 ± 2	0 of 4	0.11	Down
Mated spermatheca	6 ± 1	0 of 4	0.11	Down
Adult carcass	3 ± 0	0 of 4	0.10	Down
Larval CNS	143 ± 6	4 of 4	2.69	Up
Larval Salivary gland	8 ± 2	0 of 4	0.16	Down
Larval midgut	7 ± 1	0 of 4	0.14	Down
Larval tubule	7 ± 1	1 of 4	0.10	Down
Larval hindgut	13 ± 1	1 of 4	0.25	Down
Larval fat body	7 ± 1	1 of 4	0.10	Down
Larval trachea	33 ± 7	3 of 4	0.63	None
Larval carcass	18 ± 1	1 of 4	0.34	Down
S2 cells (growing)	141 ± 7	4 of 4	2.64	Up
Whole fly	53 ± 8	3 of 4

Looking for FBgn0039680. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720