FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039681 through 18771 annotations produced 2 hits

(CG7582):

Annotation Number : CG10944
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004922
Gbrowse : chrX:7793786-7795163 (-) // 100.0 //
Probeset : 1626924_a_at
Accessions : protein= NP_511073; /// NP_651710; /// NP_727213;, nucleotide= NM_078518; /// NM_143453; /// NM_167136;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
Interpro : 0003735 // structural constituent of ribosome // inferred from electronic annotation
FlyMine data for FBgn0004922.
BDGP gene expression has embryonic in situ data for RpS6: 4 pix of staining in 1 body parts.
BioGrid reports that CG10944 interacts with CG11327 CG1135 CG11466 CG2835 CG30115 CG7146 CG8075 CG8414 .
VDRC has 1 RNAi stocks for FBgn0004922 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2687 ± 33	4 of 4	0.80	Down
Head	3630 ± 86	4 of 4	1.10	Up
Eye	5823 ± 136	4 of 4	1.83	Up
Thoracicoabdominal ganglion	3768 ± 61	4 of 4	1.20	Up
Salivary gland	7510 ± 223	4 of 4	2.36	Up
Crop	4897 ± 227	4 of 4	1.50	Up
Midgut	4095 ± 71	4 of 4	1.30	Up
Tubule	4058 ± 32	4 of 4	1.30	Up
Hindgut	4012 ± 97	4 of 4	1.30	Up
Heart	5860 ± 395	4 of 4	1.84	Up
Fat body	4467 ± 315	4 of 4	1.40	Up
Ovary	2557 ± 74	4 of 4	0.80	Down
Testis	632 ± 19	4 of 4	0.20	Down
Male accessory glands	6574 ± 185	4 of 4	2.10	Up
Virgin spermatheca	4271 ± 170	4 of 4	1.34	Up
Mated spermatheca	4240 ± 110	4 of 4	1.33	Up
Adult carcass	4517 ± 115	4 of 4	1.40	Up
Larval CNS	2330 ± 199	4 of 4	0.73	Down
Larval Salivary gland	5240 ± 158	4 of 4	1.64	Up
Larval midgut	3114 ± 48	4 of 4	0.98	None
Larval tubule	3663 ± 60	4 of 4	1.10	Up
Larval hindgut	3479 ± 35	4 of 4	1.09	None
Larval fat body	5566 ± 569	4 of 4	1.70	Up
Larval trachea	5615 ± 142	4 of 4	1.76	Up
Larval carcass	3874 ± 234	4 of 4	1.22	None
S2 cells (growing)	3827 ± 89	4 of 4	1.20	Up
Whole fly	3186 ± 141	4 of 4

(CG7582):

Annotation Number : CG7582
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039681
Gbrowse : chr3R:25505982-25507763 (-) // 100.0 //
Probeset : 1633427_at
Accessions : protein= NP_651710;, nucleotide= NM_143453;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0039681.
VDRC has 2 RNAi stocks for FBgn0039681 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	784 ± 13	4 of 4	22.00	Up
Head	225 ± 9	4 of 4	6.30	Up
Eye	144 ± 10	4 of 4	4.06	Up
Thoracicoabdominal ganglion	762 ± 18	4 of 4	21.40	Up
Salivary gland	85 ± 8	4 of 4	2.40	Up
Crop	62 ± 2	4 of 4	1.70	Up
Midgut	60 ± 5	4 of 4	1.70	Up
Tubule	14 ± 1	2 of 4	0.40	Down
Hindgut	99 ± 4	4 of 4	2.80	Up
Heart	49 ± 8	4 of 4	1.39	None
Fat body	27 ± 4	4 of 4	0.76	Down
Ovary	5 ± 0	0 of 4	0.20	Down
Testis	27 ± 3	4 of 4	0.80	None
Male accessory glands	63 ± 2	4 of 4	1.80	Up
Virgin spermatheca	15 ± 3	4 of 4	0.44	Down
Mated spermatheca	13 ± 2	2 of 4	0.39	Down
Adult carcass	59 ± 4	4 of 4	1.70	Up
Larval CNS	95 ± 8	4 of 4	2.69	Up
Larval Salivary gland	14 ± 2	2 of 4	0.41	Down
Larval midgut	153 ± 22	4 of 4	4.30	Up
Larval tubule	23 ± 2	4 of 4	0.70	Down
Larval hindgut	22 ± 1	4 of 4	0.63	Down
Larval fat body	91 ± 3	4 of 4	2.60	Up
Larval trachea	8 ± 8	1 of 4	0.23	Down
Larval carcass	37 ± 6	4 of 4	1.06	None
S2 cells (growing)	3 ± 1	0 of 4	0.10	Down
Whole fly	35 ± 1	4 of 4

Looking for FBgn0039681. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720