FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039702 through 18771 annotations produced 1 hits

Vps16B (Vps16B):

Annotation Number : CG18112
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039702
Gbrowse : chr3R:25640784-25642172 (-) // 100.0 //
Probeset : 1633455_at
Accessions : protein= NP_651731;, nucleotide= NM_143474;
Pathway : 0005737 // cytoplasm // inferred from sequence or structural similarity
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0039702.
BioGrid reports that CG18112 interacts with CG5127 CG31175 .
TRiP has 1 RNAi stocks for FBgn0039702 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039702 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	53 ± 1	4 of 4	0.80	Down
Head	37 ± 3	4 of 4	0.50	Down
Eye	43 ± 4	4 of 4	0.61	Down
Thoracicoabdominal ganglion	47 ± 3	4 of 4	0.70	Down
Salivary gland	74 ± 6	4 of 4	1.07	None
Crop	42 ± 2	4 of 4	0.60	Down
Midgut	26 ± 3	4 of 4	0.40	Down
Tubule	27 ± 3	3 of 4	0.40	Down
Hindgut	46 ± 2	4 of 4	0.70	Down
Heart	21 ± 1	4 of 4	0.31	Down
Fat body	31 ± 3	3 of 4	0.45	Down
Ovary	102 ± 3	4 of 4	1.50	Up
Testis	39 ± 1	4 of 4	0.60	Down
Male accessory glands	149 ± 12	4 of 4	2.10	Up
Virgin spermatheca	24 ± 0	4 of 4	0.35	Down
Mated spermatheca	29 ± 1	4 of 4	0.41	Down
Adult carcass	36 ± 3	4 of 4	0.50	Down
Larval CNS	35 ± 4	4 of 4	0.50	Down
Larval Salivary gland	36 ± 3	4 of 4	0.53	Down
Larval midgut	31 ± 0	4 of 4	0.45	Down
Larval tubule	46 ± 2	4 of 4	0.70	Down
Larval hindgut	33 ± 1	4 of 4	0.48	Down
Larval fat body	42 ± 3	4 of 4	0.60	Down
Larval trachea	40 ± 7	4 of 4	0.58	Down
Larval carcass	30 ± 1	4 of 4	0.44	Down
S2 cells (growing)	110 ± 1	4 of 4	1.57	Up
Whole fly	70 ± 5	4 of 4

Looking for FBgn0039702. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720