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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0039722 through 18771 annotations produced 1 hits



Drm-myotropin (capa):

Annotation Number : CG15520
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039722
Gbrowse : chr3R:25738706-25740050 (-) // 100.0 //
Probeset : 1629136_at
Accessions : protein= NP_524552;, nucleotide= NM_079828;
Pathway : 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from d
Interpro : 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005184 // neuropeptide hormone activ
FlyMine data for FBgn0039722.
BioGrid reports that CG15520 interacts with CG7191 .
TRiP has 1 RNAi stocks for FBgn0039722 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039722 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain908 ± 184 of 421.10Up
Head252 ± 84 of 4 5.90Up
Eye38 ± 44 of 4 0.89None
Thoracicoabdominal ganglion1843 ± 354 of 442.90Up
Salivary gland4 ± 10 of 4 0.09Down
Crop1 ± 00 of 4 0.00Down
Midgut4 ± 10 of 4 0.10Down
Tubule3 ± 00 of 4 0.10Down
Hindgut3 ± 10 of 4 0.10Down
Heart1 ± 00 of 4 0.03Down
Fat body7 ± 80 of 4 0.17Down
Ovary1 ± 00 of 4 0.00Down
Testis1 ± 00 of 4 0.00Down
Male accessory glands7 ± 20 of 4 0.20Down
Virgin spermatheca5 ± 10 of 4 0.12Down
Mated spermatheca2 ± 00 of 4 0.05Down
Adult carcass11 ± 41 of 4 0.30Down
Larval CNS422 ± 734 of 4 9.82Up
Larval Salivary gland10 ± 20 of 4 0.25Down
Larval midgut8 ± 00 of 4 0.19Down
Larval tubule3 ± 00 of 4 0.10Down
Larval hindgut1 ± 00 of 4 0.04Down
Larval fat body6 ± 20 of 4 0.10Down
Larval trachea1 ± 00 of 4 0.03Down
Larval carcass1 ± 00 of 4 0.04Down
S2 cells (growing)2 ± 00 of 4 0.05Down
Whole fly43 ± 34 of 4

Looking for FBgn0039722. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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