FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039754 through 18771 annotations produced 1 hits

(CG9747):

Annotation Number : CG9747
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039754
Gbrowse : chr3R:26011141-26016799 (-) // 100.0 //
Probeset : 1632106_at
Accessions : protein= NP_651779;, nucleotide= NM_143522;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
Interpro : "0004768 // stearoyl-CoA 9-desaturase activity // inferred from electronic annotation /// 0005515 // protein binding //
FlyMine data for FBgn0039754.
BDGP gene expression has embryonic in situ data for CG9747: 49 pix of staining in 16 body parts.
VDRC has 2 RNAi stocks for FBgn0039754 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 1	0 of 4	0.00	Down
Head	404 ± 34	4 of 4	2.30	Up
Eye	31 ± 1	4 of 4	0.18	Down
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.00	Down
Salivary gland	42 ± 6	3 of 4	0.24	Down
Crop	17 ± 1	1 of 4	0.10	Down
Midgut	64 ± 4	4 of 4	0.40	Down
Tubule	6 ± 1	0 of 4	0.00	Down
Hindgut	39 ± 5	2 of 4	0.20	Down
Heart	5 ± 1	0 of 4	0.03	Down
Fat body	22 ± 7	1 of 4	0.13	Down
Ovary	115 ± 8	4 of 4	0.70	None
Testis	39 ± 1	4 of 4	0.20	Down
Male accessory glands	304 ± 30	4 of 4	1.70	Up
Virgin spermatheca	108 ± 7	4 of 4	0.61	None
Mated spermatheca	90 ± 5	4 of 4	0.51	Down
Adult carcass	29 ± 6	2 of 4	0.20	Down
Larval CNS	13 ± 2	0 of 4	0.08	Down
Larval Salivary gland	114 ± 8	4 of 4	0.65	None
Larval midgut	85 ± 9	4 of 4	0.49	Down
Larval tubule	6 ± 2	0 of 4	0.00	Down
Larval hindgut	349 ± 47	4 of 4	1.98	Up
Larval fat body	10 ± 1	0 of 4	0.10	Down
Larval trachea	99 ± 24	4 of 4	0.56	Down
Larval carcass	33 ± 5	2 of 4	0.19	Down
S2 cells (growing)	2 ± 0	0 of 4	0.01	Down
Whole fly	176 ± 25	4 of 4

Looking for FBgn0039754. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720