FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039765 through 18771 annotations produced 1 hits

mitochondrial ribosomal protein S18C (mRpS18C):

Annotation Number : CG9688
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039765
Gbrowse : chr3R:26249733-26250211 (+) // 100.0 //
Probeset : 1628621_at
Accessions : protein= NP_524593;, nucleotide= NM_079854;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005763 // mitochondrial small ribosomal subunit //
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0039765.
VDRC has 2 RNAi stocks for FBgn0039765 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	217 ± 2	4 of 4	1.70	Up
Head	117 ± 6	4 of 4	0.90	None
Eye	119 ± 6	4 of 4	0.91	None
Thoracicoabdominal ganglion	244 ± 7	4 of 4	1.90	Up
Salivary gland	94 ± 8	4 of 4	0.73	Down
Crop	95 ± 4	4 of 4	0.70	Down
Midgut	131 ± 6	4 of 4	1.00	None
Tubule	71 ± 2	4 of 4	0.60	Down
Hindgut	100 ± 4	4 of 4	0.80	Down
Heart	103 ± 8	4 of 4	0.80	None
Fat body	115 ± 15	4 of 4	0.89	None
Ovary	181 ± 3	4 of 4	1.40	Up
Testis	145 ± 1	4 of 4	1.10	None
Male accessory glands	77 ± 6	4 of 4	0.60	Down
Virgin spermatheca	76 ± 5	4 of 4	0.58	Down
Mated spermatheca	97 ± 9	4 of 4	0.75	Down
Adult carcass	102 ± 5	4 of 4	0.80	None
Larval CNS	192 ± 11	4 of 4	1.48	Up
Larval Salivary gland	93 ± 7	4 of 4	0.72	Down
Larval midgut	81 ± 9	4 of 4	0.62	Down
Larval tubule	48 ± 1	4 of 4	0.40	Down
Larval hindgut	82 ± 4	4 of 4	0.64	Down
Larval fat body	53 ± 6	4 of 4	0.40	Down
Larval trachea	119 ± 18	4 of 4	0.92	None
Larval carcass	74 ± 10	4 of 4	0.57	Down
S2 cells (growing)	119 ± 5	4 of 4	0.92	None
Whole fly	130 ± 9	4 of 4

Looking for FBgn0039765. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720