FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039766 through 18771 annotations produced 1 hits

(CG15536):

Annotation Number : CG15536
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039766
Gbrowse : chr3R:26250292-26250859 (-) // 100.0 //
Probeset : 1639265_at
Accessions : protein= NP_651789;, nucleotide= NM_143532;
FlyMine data for FBgn0039766.
VDRC has 1 RNAi stocks for FBgn0039766 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	60 ± 1	4 of 4	1.10	None
Head	44 ± 1	4 of 4	0.80	Down
Eye	97 ± 2	4 of 4	1.75	Up
Thoracicoabdominal ganglion	87 ± 3	4 of 4	1.60	Up
Salivary gland	37 ± 4	4 of 4	0.67	Down
Crop	36 ± 2	4 of 4	0.70	Down
Midgut	39 ± 3	4 of 4	0.70	Down
Tubule	27 ± 0	4 of 4	0.50	Down
Hindgut	36 ± 3	4 of 4	0.60	Down
Heart	55 ± 3	4 of 4	0.99	None
Fat body	51 ± 2	4 of 4	0.92	None
Ovary	80 ± 2	4 of 4	1.40	Up
Testis	130 ± 6	4 of 4	2.30	Up
Male accessory glands	38 ± 3	4 of 4	0.70	Down
Virgin spermatheca	44 ± 3	4 of 4	0.80	Down
Mated spermatheca	42 ± 2	4 of 4	0.76	Down
Adult carcass	44 ± 3	4 of 4	0.80	Down
Larval CNS	74 ± 6	4 of 4	1.34	Up
Larval Salivary gland	26 ± 3	4 of 4	0.47	Down
Larval midgut	29 ± 3	4 of 4	0.53	Down
Larval tubule	49 ± 3	4 of 4	0.90	None
Larval hindgut	27 ± 3	4 of 4	0.50	Down
Larval fat body	59 ± 3	4 of 4	1.10	None
Larval trachea	66 ± 6	4 of 4	1.20	Up
Larval carcass	23 ± 2	4 of 4	0.43	Down
S2 cells (growing)	69 ± 1	4 of 4	1.24	Up
Whole fly	55 ± 2	4 of 4

Looking for FBgn0039766. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720