FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039846 through 18771 annotations produced 1 hits

(CG11337):

Annotation Number : CG11337
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039846
Gbrowse : chr3R:27227556-27231174 (-) // 100.0 //
Probeset : 1630865_s_at
Accessions : protein= NP_001097990; /// NP_001163783; /// NP_651867; /// NP_733429;, nucleotide= NM_001104520; /// NM_001170312; /// NM_143610; /// NM_170550;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation
Interpro : 0000175 // 3'-5'-exoribonuclease activity // inferred from electronic annotation /// 0003723 // RNA binding // inferred
FlyMine data for FBgn0039846.
BDGP gene expression has embryonic in situ data for CG11337: 15 pix of staining in 11 body parts.
BioGrid reports that CG11337 interacts with CG31121 CG1391 CG6741 CG7386 .
VDRC has 3 RNAi stocks for FBgn0039846 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	42 ± 2	4 of 4	0.50	Down
Head	44 ± 4	4 of 4	0.50	Down
Eye	36 ± 1	4 of 4	0.44	Down
Thoracicoabdominal ganglion	54 ± 2	4 of 4	0.70	Down
Salivary gland	80 ± 11	4 of 4	0.97	None
Crop	64 ± 1	4 of 4	0.80	Down
Midgut	52 ± 3	4 of 4	0.60	Down
Tubule	49 ± 0	4 of 4	0.60	Down
Hindgut	50 ± 3	4 of 4	0.60	Down
Heart	49 ± 4	4 of 4	0.60	Down
Fat body	86 ± 3	4 of 4	1.05	None
Ovary	173 ± 0	4 of 4	2.10	Up
Testis	63 ± 1	4 of 4	0.80	Down
Male accessory glands	56 ± 3	4 of 4	0.70	Down
Virgin spermatheca	63 ± 2	4 of 4	0.77	Down
Mated spermatheca	54 ± 9	4 of 4	0.66	None
Adult carcass	69 ± 7	4 of 4	0.80	None
Larval CNS	114 ± 4	4 of 4	1.40	Up
Larval Salivary gland	104 ± 2	4 of 4	1.27	Up
Larval midgut	58 ± 4	4 of 4	0.72	Down
Larval tubule	47 ± 3	4 of 4	0.60	Down
Larval hindgut	109 ± 5	4 of 4	1.33	Up
Larval fat body	49 ± 1	4 of 4	0.60	Down
Larval trachea	86 ± 6	4 of 4	1.05	None
Larval carcass	94 ± 15	4 of 4	1.15	None
S2 cells (growing)	111 ± 1	4 of 4	1.36	Up
Whole fly	82 ± 1	4 of 4

Looking for FBgn0039846. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720