FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039861 through 18771 annotations produced 1 hits

partner of drosha (pasha):

Annotation Number : CG1800
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039861
Gbrowse : chr3R:27443698-27447197 (+) // 100.0 //
Probeset : 1637101_at
Accessions : protein= NP_651879;, nucleotide= NM_143622;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred fro
FlyMine data for FBgn0039861.
BioGrid reports that CG1800 interacts with CG8730 CG3497 .
TRiP has 2 RNAi stocks for FBgn0039861 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039861 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	64 ± 3	4 of 4	1.00	None
Head	34 ± 3	4 of 4	0.50	Down
Eye	27 ± 1	4 of 4	0.42	Down
Thoracicoabdominal ganglion	67 ± 3	4 of 4	1.00	None
Salivary gland	47 ± 8	0 of 4	0.72	None
Crop	33 ± 1	4 of 4	0.50	Down
Midgut	29 ± 2	4 of 4	0.40	Down
Tubule	155 ± 9	4 of 4	2.40	Up
Hindgut	25 ± 1	4 of 4	0.40	Down
Heart	38 ± 3	4 of 4	0.58	Down
Fat body	36 ± 3	4 of 4	0.56	Down
Ovary	138 ± 5	4 of 4	2.10	Up
Testis	59 ± 5	4 of 4	0.90	None
Male accessory glands	41 ± 4	3 of 4	0.60	Down
Virgin spermatheca	38 ± 1	4 of 4	0.59	Down
Mated spermatheca	34 ± 1	4 of 4	0.53	Down
Adult carcass	32 ± 5	2 of 4	0.50	Down
Larval CNS	112 ± 6	4 of 4	1.72	Up
Larval Salivary gland	57 ± 1	4 of 4	0.88	None
Larval midgut	29 ± 2	4 of 4	0.45	Down
Larval tubule	217 ± 2	4 of 4	3.30	Up
Larval hindgut	34 ± 1	4 of 4	0.53	Down
Larval fat body	33 ± 5	3 of 4	0.50	Down
Larval trachea	53 ± 8	4 of 4	0.82	None
Larval carcass	45 ± 3	4 of 4	0.69	Down
S2 cells (growing)	48 ± 3	4 of 4	0.74	Down
Whole fly	65 ± 3	4 of 4

Looking for FBgn0039861. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720