FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039875 through 18771 annotations produced 1 hits

septin-interacting protein 3 (sip3):

Annotation Number : CG1937
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039875
Gbrowse : chr3R:27597937-27600505 (+) // 99.39 //
Probeset : 1640897_at
Accessions : protein= NP_651894;, nucleotide= NM_143637;
Pathway : 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electro
FlyMine data for FBgn0039875.
BDGP gene expression has embryonic in situ data for CG1937: 15 pix of staining in 7 body parts.
BioGrid reports that CG1937 interacts with CG5711 .
VDRC has 2 RNAi stocks for FBgn0039875 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	165 ± 4	4 of 4	1.00	None
Head	153 ± 4	4 of 4	0.90	None
Eye	231 ± 8	4 of 4	1.38	Up
Thoracicoabdominal ganglion	153 ± 5	4 of 4	0.90	None
Salivary gland	596 ± 36	4 of 4	3.56	Up
Crop	189 ± 10	4 of 4	1.10	None
Midgut	213 ± 4	4 of 4	1.30	Up
Tubule	138 ± 6	4 of 4	0.80	Down
Hindgut	172 ± 4	4 of 4	1.00	None
Heart	378 ± 21	4 of 4	2.26	Up
Fat body	310 ± 14	4 of 4	1.85	Up
Ovary	167 ± 4	4 of 4	1.00	None
Testis	729 ± 35	4 of 4	4.30	Up
Male accessory glands	518 ± 25	4 of 4	3.10	Up
Virgin spermatheca	205 ± 15	4 of 4	1.22	None
Mated spermatheca	214 ± 5	4 of 4	1.28	Up
Adult carcass	227 ± 10	4 of 4	1.40	Up
Larval CNS	167 ± 4	4 of 4	1.00	None
Larval Salivary gland	797 ± 36	4 of 4	4.75	Up
Larval midgut	207 ± 7	4 of 4	1.24	Up
Larval tubule	276 ± 7	4 of 4	1.70	Up
Larval hindgut	185 ± 5	4 of 4	1.11	Up
Larval fat body	697 ± 10	4 of 4	4.20	Up
Larval trachea	311 ± 62	4 of 4	1.86	Up
Larval carcass	176 ± 3	4 of 4	1.05	None
S2 cells (growing)	494 ± 5	4 of 4	2.95	Up
Whole fly	167 ± 4	4 of 4

Looking for FBgn0039875. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720