FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039890 through 18771 annotations produced 1 hits

(CG2316):

Annotation Number : CG2316
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039890
Gbrowse : chr4:204841-214448 (-) // 100.0 //
Probeset : 1625172_s_at
Accessions : protein= NP_651906; /// NP_726542; /// NP_726543; /// NP_726544; /// NP_726545; /// NP_726546; /// NP_726547;, nucleotide= NM_143649; /// NM_166736; /// NM_166737; /// NM_166738; /// NM_166739; /// NM_166740; /// NM_166741;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred fr
FlyMine data for FBgn0039890.
Homophila reports that CG2316 is a close match (4e-106) to human gene ABCD3;PMP70;PXMP1 (NP_002849), a gene associated with Zellweger syndrome-2 (3).
VDRC has 3 RNAi stocks for FBgn0039890 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	597 ± 13	4 of 4	1.90	Up
Head	356 ± 9	4 of 4	1.10	None
Eye	222 ± 14	4 of 4	0.71	Down
Thoracicoabdominal ganglion	428 ± 23	4 of 4	1.40	Up
Salivary gland	376 ± 22	4 of 4	1.20	None
Crop	372 ± 24	4 of 4	1.20	None
Midgut	953 ± 33	4 of 4	3.00	Up
Tubule	337 ± 8	4 of 4	1.10	Up
Hindgut	508 ± 10	4 of 4	1.60	Up
Heart	303 ± 14	4 of 4	0.97	None
Fat body	509 ± 42	4 of 4	1.62	Up
Ovary	572 ± 4	4 of 4	1.80	Up
Testis	89 ± 6	4 of 4	0.30	Down
Male accessory glands	416 ± 18	4 of 4	1.30	Up
Virgin spermatheca	258 ± 23	4 of 4	0.82	None
Mated spermatheca	233 ± 10	4 of 4	0.74	Down
Adult carcass	327 ± 26	4 of 4	1.00	None
Larval CNS	491 ± 32	4 of 4	1.56	Up
Larval Salivary gland	343 ± 11	4 of 4	1.09	None
Larval midgut	1497 ± 93	4 of 4	4.77	Up
Larval tubule	625 ± 29	4 of 4	2.00	Up
Larval hindgut	451 ± 7	4 of 4	1.44	Up
Larval fat body	452 ± 27	4 of 4	1.40	Up
Larval trachea	295 ± 14	4 of 4	0.94	None
Larval carcass	265 ± 11	4 of 4	0.85	None
S2 cells (growing)	426 ± 12	4 of 4	1.36	Up
Whole fly	314 ± 15	4 of 4

Looking for FBgn0039890. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720