FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039909 through 18771 annotations produced 1 hits

NADH ubiquinone oxidoreductase 49 kDa /// NADH:ubiquinone oxidoreductase 49 kDa subunit (CG1970 /// DpseGA25154):

Annotation Number : CG1970
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039909
Gbrowse : chr4:588913-591420 (-) // 100.0 //
Probeset : 1630695_at
Accessions : protein= NP_651926;, nucleotide= NM_143669;
Pathway : NADH to ubiquinone // inferred from sequence or structural similarity /// 0019684 // photosynthesis
Interpro : light reaction // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from electronic an
FlyMine data for FBgn0039909.
BDGP gene expression has embryonic in situ data for CG1970: 15 pix of staining in 6 body parts.
Homophila reports that CG1970 is a close match (0) to human gene NDUFS2 (NP_004541), a gene associated with Mitochondrial complex I deficiency, 252010 (3).
BioGrid reports that CG1970 interacts with CG5373 CG2830 Dmel CG14425 .
TRiP has 1 RNAi stocks for FBgn0039909 available for purchase.
VDRC has 4 RNAi stocks for FBgn0039909 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1675 ± 27	4 of 4	1.30	Up
Head	1725 ± 28	4 of 4	1.30	Up
Eye	1163 ± 31	4 of 4	0.89	Down
Thoracicoabdominal ganglion	2136 ± 61	4 of 4	1.60	Up
Salivary gland	2014 ± 81	4 of 4	1.55	Up
Crop	1309 ± 34	4 of 4	1.00	None
Midgut	1204 ± 37	4 of 4	0.90	None
Tubule	2579 ± 45	4 of 4	2.00	Up
Hindgut	1796 ± 22	4 of 4	1.40	Up
Heart	1966 ± 23	4 of 4	1.51	Up
Fat body	1676 ± 171	4 of 4	1.29	Up
Ovary	579 ± 5	4 of 4	0.40	Down
Testis	147 ± 1	4 of 4	0.10	Down
Male accessory glands	867 ± 10	4 of 4	0.70	Down
Virgin spermatheca	1541 ± 49	4 of 4	1.19	Up
Mated spermatheca	1424 ± 58	4 of 4	1.10	None
Adult carcass	3121 ± 142	4 of 4	2.40	Up
Larval CNS	821 ± 20	4 of 4	0.63	Down
Larval Salivary gland	1201 ± 34	4 of 4	0.92	None
Larval midgut	901 ± 40	4 of 4	0.69	Down
Larval tubule	888 ± 39	4 of 4	0.70	Down
Larval hindgut	1404 ± 63	4 of 4	1.08	None
Larval fat body	511 ± 52	4 of 4	0.40	Down
Larval trachea	797 ± 37	4 of 4	0.61	Down
Larval carcass	1502 ± 133	4 of 4	1.15	None
S2 cells (growing)	581 ± 7	4 of 4	0.45	Down
Whole fly	1300 ± 37	4 of 4

Looking for FBgn0039909. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720