Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0039932 through 18771 annotations produced 1 hits



(CG11093):

Annotation Number : CG11093
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039932
Gbrowse : chr4:982966-990000 (-) // 100.0 //
Probeset : 1634195_at
Accessions : protein= NP_001162829; /// NP_001162830;, nucleotide= NM_001169358; /// NM_001169359;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic
FlyMine data for FBgn0039932.
VDRC has 2 RNAi stocks for FBgn0039932 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain27 ± 24 of 4 5.40Up
Head10 ± 14 of 4 2.10Up
Eye22 ± 24 of 4 4.47Up
Thoracicoabdominal ganglion16 ± 04 of 4 3.20Up
Salivary gland8 ± 20 of 4 1.68None
Crop18 ± 24 of 4 3.70Up
Midgut5 ± 00 of 4 1.00None
Tubule3 ± 00 of 4 0.60Down
Hindgut6 ± 22 of 4 1.20None
Heart32 ± 44 of 4 6.49Up
Fat body17 ± 14 of 4 3.47Up
Ovary9 ± 04 of 4 1.90None
Testis6 ± 00 of 4 1.30None
Male accessory glands109 ± 104 of 421.90Up
Virgin spermatheca13 ± 13 of 4 2.79Up
Mated spermatheca7 ± 13 of 4 1.58None
Adult carcass11 ± 02 of 4 2.20Up
Larval CNS38 ± 24 of 4 7.80Up
Larval Salivary gland11 ± 20 of 4 2.20None
Larval midgut6 ± 20 of 4 1.21None
Larval tubule4 ± 11 of 4 0.80None
Larval hindgut8 ± 12 of 4 1.66None
Larval fat body22 ± 12 of 4 4.40Up
Larval trachea21 ± 24 of 4 4.25Up
Larval carcass2 ± 00 of 4 0.54None
S2 cells (growing)45 ± 34 of 4 9.16Up
Whole fly5 ± 12 of 4

Looking for FBgn0039932. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime