FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039946 through 18771 annotations produced 1 hits

(A+T)-stretch binding protein (ATbp):

Annotation Number : CG40145
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039946
Gbrowse : chrXHet:84921-87149 (+) // 100.0 //
Probeset : 1637859_at
Accessions : protein= NP_001104481;, nucleotide= NM_001111011;
Pathway : DNA-dependent // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 000563
FlyMine data for FBgn0039946.
TRiP has 1 RNAi stocks for FBgn0039946 available for purchase.
VDRC has 1 RNAi stocks for FBgn0039946 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	67 ± 1	4 of 4	4.60	Up
Head	24 ± 0	4 of 4	1.70	Up
Eye	24 ± 2	4 of 4	1.69	Up
Thoracicoabdominal ganglion	57 ± 6	4 of 4	3.90	Up
Salivary gland	32 ± 6	3 of 4	2.19	None
Crop	15 ± 2	4 of 4	1.10	None
Midgut	9 ± 1	1 of 4	0.70	None
Tubule	10 ± 0	1 of 4	0.70	Down
Hindgut	12 ± 1	4 of 4	0.80	None
Heart	8 ± 1	2 of 4	0.55	None
Fat body	19 ± 3	4 of 4	1.35	None
Ovary	40 ± 1	4 of 4	2.80	Up
Testis	5 ± 0	1 of 4	0.40	Down
Male accessory glands	13 ± 1	2 of 4	0.90	None
Virgin spermatheca	15 ± 1	4 of 4	1.03	None
Mated spermatheca	18 ± 0	4 of 4	1.25	None
Adult carcass	14 ± 5	1 of 4	1.00	None
Larval CNS	73 ± 6	4 of 4	5.03	Up
Larval Salivary gland	26 ± 1	4 of 4	1.79	Up
Larval midgut	9 ± 1	2 of 4	0.68	None
Larval tubule	18 ± 0	4 of 4	1.30	None
Larval hindgut	15 ± 1	4 of 4	1.08	None
Larval fat body	13 ± 1	2 of 4	0.90	None
Larval trachea	26 ± 4	4 of 4	1.81	Up
Larval carcass	12 ± 1	4 of 4	0.86	None
S2 cells (growing)	18 ± 0	4 of 4	1.26	None
Whole fly	14 ± 2	4 of 4

Looking for FBgn0039946. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720