FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0039959 through 18771 annotations produced 1 hits

(CG17514):

Annotation Number : CG17514
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039959
Gbrowse : chr2RHet:2775859-2821208 (+) // 100.0 //
Probeset : 1628691_at
Accessions : protein= NP_001015316; /// NP_001163841; /// NP_001163842; /// NP_001163843;, nucleotide= NM_001015316; /// NM_001170370; /// NM_001170371; /// NM_001170372;
Interpro : 0005488 // binding // inferred from electronic annotation /// 0008494 // translation activator activity // inferred from
FlyMine data for FBgn0039959.
TRiP has 1 RNAi stocks for FBgn0039959 available for purchase.
VDRC has 3 RNAi stocks for FBgn0039959 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1009 ± 24	4 of 4	1.40	Up
Head	629 ± 25	4 of 4	0.90	None
Eye	484 ± 30	4 of 4	0.68	Down
Thoracicoabdominal ganglion	900 ± 19	4 of 4	1.30	Up
Salivary gland	766 ± 28	4 of 4	1.08	None
Crop	656 ± 24	4 of 4	0.90	None
Midgut	634 ± 24	4 of 4	0.90	None
Tubule	729 ± 15	4 of 4	1.00	None
Hindgut	633 ± 20	4 of 4	0.90	None
Heart	679 ± 9	4 of 4	0.96	None
Fat body	1061 ± 92	4 of 4	1.50	Up
Ovary	1506 ± 31	4 of 4	2.10	Up
Testis	279 ± 15	4 of 4	0.40	Down
Male accessory glands	1136 ± 39	4 of 4	1.60	Up
Virgin spermatheca	1448 ± 102	4 of 4	2.05	Up
Mated spermatheca	1723 ± 91	4 of 4	2.44	Up
Adult carcass	530 ± 32	4 of 4	0.70	None
Larval CNS	1191 ± 75	4 of 4	1.68	Up
Larval Salivary gland	1062 ± 45	4 of 4	1.50	Up
Larval midgut	652 ± 14	4 of 4	0.92	None
Larval tubule	1229 ± 35	4 of 4	1.70	Up
Larval hindgut	906 ± 42	4 of 4	1.28	Up
Larval fat body	696 ± 32	4 of 4	1.00	None
Larval trachea	1184 ± 100	4 of 4	1.68	Up
Larval carcass	765 ± 47	4 of 4	1.08	None
S2 cells (growing)	850 ± 14	4 of 4	1.20	None
Whole fly	707 ± 61	4 of 4

Looking for FBgn0039959. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720