FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040056 through 18771 annotations produced 2 hits

(CG17698):

Annotation Number : CG17698
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040056
Gbrowse : chr3L:23731064-23742971 (+) // 100.0 //
Probeset : 1641241_at
Accessions : protein= NP_001036632; /// NP_001036633; /// NP_001036634;, nucleotide= NM_001043167; /// NM_001043168; /// NM_001043169;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0040056.
Homophila reports that CG17698 is a close match (8e-11) to human gene SRK;STD;ZAP70 (NP_997402), a gene associated with Selective T-cell defect (3).
TRiP has 1 RNAi stocks for FBgn0040056 available for purchase.
VDRC has 3 RNAi stocks for FBgn0040056 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	146 ± 8	4 of 4	3.00	Up
Head	69 ± 1	4 of 4	1.40	Up
Eye	57 ± 2	4 of 4	1.17	None
Thoracicoabdominal ganglion	120 ± 5	4 of 4	2.40	Up
Salivary gland	63 ± 7	4 of 4	1.30	None
Crop	39 ± 3	4 of 4	0.80	None
Midgut	27 ± 1	4 of 4	0.60	Down
Tubule	20 ± 0	4 of 4	0.40	Down
Hindgut	46 ± 4	4 of 4	0.90	None
Heart	24 ± 2	4 of 4	0.49	Down
Fat body	42 ± 5	4 of 4	0.86	None
Ovary	55 ± 3	4 of 4	1.10	None
Testis	7 ± 0	4 of 4	0.20	Down
Male accessory glands	69 ± 5	4 of 4	1.40	Up
Virgin spermatheca	16 ± 1	4 of 4	0.34	Down
Mated spermatheca	24 ± 3	4 of 4	0.49	Down
Adult carcass	55 ± 4	4 of 4	1.10	None
Larval CNS	43 ± 6	4 of 4	0.89	None
Larval Salivary gland	56 ± 6	4 of 4	1.14	None
Larval midgut	18 ± 1	4 of 4	0.36	Down
Larval tubule	29 ± 1	4 of 4	0.60	Down
Larval hindgut	32 ± 1	4 of 4	0.67	Down
Larval fat body	54 ± 3	4 of 4	1.10	None
Larval trachea	54 ± 6	4 of 4	1.11	None
Larval carcass	33 ± 2	4 of 4	0.68	Down
S2 cells (growing)	56 ± 2	4 of 4	1.14	None
Whole fly	49 ± 3	4 of 4

(CG17698):

Annotation Number : CG17698
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040056
Gbrowse : chr3L:23731064-23734193 (+) // 100.0 //
Probeset : 1638619_s_at
Accessions : protein= NP_001036632; /// NP_001036633; /// NP_001036634;, nucleotide= NM_001043167; /// NM_001043168; /// NM_001043169;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0040056.
Homophila reports that CG17698 is a close match (8e-11) to human gene SRK;STD;ZAP70 (NP_997402), a gene associated with Selective T-cell defect (3).
TRiP has 1 RNAi stocks for FBgn0040056 available for purchase.
VDRC has 3 RNAi stocks for FBgn0040056 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	297 ± 7	4 of 4	4.80	Up
Head	94 ± 13	4 of 4	1.50	None
Eye	27 ± 4	4 of 4	0.45	Down
Thoracicoabdominal ganglion	178 ± 16	4 of 4	2.90	Up
Salivary gland	30 ± 4	3 of 4	0.49	Down
Crop	53 ± 8	4 of 4	0.90	None
Midgut	19 ± 0	3 of 4	0.30	Down
Tubule	7 ± 0	1 of 4	0.10	Down
Hindgut	42 ± 4	4 of 4	0.70	None
Heart	8 ± 1	4 of 4	0.14	Down
Fat body	37 ± 18	4 of 4	0.60	None
Ovary	110 ± 8	4 of 4	1.80	Up
Testis	4 ± 0	1 of 4	0.10	Down
Male accessory glands	30 ± 4	4 of 4	0.50	Down
Virgin spermatheca	8 ± 1	2 of 4	0.13	Down
Mated spermatheca	9 ± 1	3 of 4	0.14	Down
Adult carcass	29 ± 4	3 of 4	0.50	Down
Larval CNS	50 ± 2	4 of 4	0.81	None
Larval Salivary gland	26 ± 3	4 of 4	0.42	Down
Larval midgut	8 ± 2	1 of 4	0.13	Down
Larval tubule	18 ± 1	4 of 4	0.30	Down
Larval hindgut	28 ± 3	4 of 4	0.46	Down
Larval fat body	59 ± 6	4 of 4	1.00	None
Larval trachea	20 ± 4	4 of 4	0.33	Down
Larval carcass	23 ± 1	4 of 4	0.38	Down
S2 cells (growing)	136 ± 6	4 of 4	2.20	Up
Whole fly	62 ± 7	4 of 4

Looking for FBgn0040056. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720