FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040074 through 18771 annotations produced 1 hits

retinin (retinin):

Annotation Number : CG13057
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040074
Gbrowse : chr3L:16325018-16325893 (+) // 99.51 //
Probeset : 1633499_at
Accessions : protein= NP_524995;, nucleotide= NM_080256;
Pathway : 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from e
Interpro : 0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0015293 // symporter ac
FlyMine data for FBgn0040074.
BDGP gene expression has embryonic in situ data for retinin: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0040074 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.00	Down
Head	4488 ± 171	4 of 4	16.80	Up
Eye	10260 ± 254	4 of 4	38.43	Up
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.00	Down
Salivary gland	15 ± 4	0 of 4	0.06	Down
Crop	3 ± 2	0 of 4	0.00	Down
Midgut	1 ± 0	0 of 4	0.00	Down
Tubule	3 ± 0	0 of 4	0.00	Down
Hindgut	1 ± 0	0 of 4	0.00	Down
Heart	47 ± 18	3 of 4	0.18	Down
Fat body	7 ± 4	0 of 4	0.03	Down
Ovary	2 ± 0	0 of 4	0.00	Down
Testis	9 ± 2	1 of 4	0.00	Down
Male accessory glands	7 ± 2	0 of 4	0.00	Down
Virgin spermatheca	2 ± 1	0 of 4	0.01	Down
Mated spermatheca	3 ± 1	0 of 4	0.01	Down
Adult carcass	2 ± 0	0 of 4	0.00	Down
Larval CNS	4 ± 3	0 of 4	0.02	Down
Larval Salivary gland	3 ± 1	0 of 4	0.01	Down
Larval midgut	11 ± 3	0 of 4	0.04	Down
Larval tubule	3 ± 0	0 of 4	0.00	Down
Larval hindgut	7 ± 0	0 of 4	0.03	Down
Larval fat body	3 ± 0	0 of 4	0.00	Down
Larval trachea	602 ± 1156	3 of 4	2.26	None
Larval carcass	2 ± 0	0 of 4	0.01	Down
S2 cells (growing)	2 ± 0	0 of 4	0.01	Down
Whole fly	267 ± 45	4 of 4

Looking for FBgn0040074. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720