Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040211 through 18771 annotations produced 1 hits



chr2L:11136394-11138567 (+) // 100.0 // ("homogentisate 1):

Annotation Number : CG4779
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1633492_at
Accessions : protein= EC:1.13.11.5, nucleotide=
Interpro : 0006559 // L-phenylalanine catabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catab
Homophila reports that CG4779 is a close match (2e-177) to human gene AKU;HGD (NP_000178), a gene associated with Alkaptonuria, 203500 (3).
BioGrid reports that CG4779 interacts with CG4779 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 00 of 4 0.10Down
Head182 ± 164 of 4 3.00Up
Eye110 ± 74 of 4 1.84Up
Thoracicoabdominal ganglion8 ± 31 of 4 0.10Down
Salivary gland15 ± 50 of 4 0.26Down
Crop1 ± 00 of 4 0.00Down
Midgut8 ± 30 of 4 0.10Down
Tubule18 ± 22 of 4 0.30Down
Hindgut4 ± 10 of 4 0.10Down
Heart32 ± 44 of 4 0.54None
Fat body18 ± 22 of 4 0.31Down
Ovary0 ± 00 of 4 0.00Down
Testis2 ± 00 of 4 0.00Down
Male accessory glands4 ± 00 of 4 0.10Down
Virgin spermatheca6 ± 10 of 4 0.10Down
Mated spermatheca4 ± 10 of 4 0.08Down
Adult carcass598 ± 204 of 4 9.90Up
Larval CNS1 ± 20 of 4 0.03Down
Larval Salivary gland2 ± 10 of 4 0.04Down
Larval midgut3 ± 10 of 4 0.05Down
Larval tubule2 ± 10 of 4 0.00Down
Larval hindgut2 ± 10 of 4 0.04Down
Larval fat body10 ± 30 of 4 0.20Down
Larval trachea6 ± 40 of 4 0.12Down
Larval carcass255 ± 674 of 4 4.25None
S2 cells (growing)0 ± 00 of 4 0.02Down
Whole fly60 ± 94 of 4

Looking for FBgn0040211. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime