Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040237 through 18771 annotations produced 1 hits



belphegor (bor):

Annotation Number : CG6815
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040237
Gbrowse : chr3R:12087076-12089810 (-) // 99.79 //
Probeset : 1628099_at
Accessions : protein= NP_524996;, nucleotide= NM_080257;
Pathway : 0005737 // cytoplasm // non-traceable author statement
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electro
FlyMine data for FBgn0040237.
VDRC has 4 RNAi stocks for FBgn0040237 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain199 ± 44 of 4 0.60Down
Head132 ± 34 of 4 0.40Down
Eye93 ± 234 of 4 0.29Down
Thoracicoabdominal ganglion276 ± 94 of 4 0.90Down
Salivary gland155 ± 84 of 4 0.49Down
Crop140 ± 64 of 4 0.40Down
Midgut183 ± 74 of 4 0.60Down
Tubule296 ± 274 of 4 0.90None
Hindgut109 ± 34 of 4 0.30Down
Heart187 ± 134 of 4 0.59Down
Fat body249 ± 344 of 4 0.78Down
Ovary491 ± 114 of 4 1.50Up
Testis595 ± 404 of 4 1.90Up
Male accessory glands152 ± 64 of 4 0.50Down
Virgin spermatheca345 ± 284 of 4 1.08None
Mated spermatheca439 ± 434 of 4 1.37None
Adult carcass146 ± 94 of 4 0.50Down
Larval CNS276 ± 134 of 4 0.86Down
Larval Salivary gland198 ± 144 of 4 0.62Down
Larval midgut163 ± 174 of 4 0.51Down
Larval tubule61 ± 04 of 4 0.20Down
Larval hindgut209 ± 314 of 4 0.65Down
Larval fat body136 ± 404 of 4 0.40Down
Larval trachea210 ± 404 of 4 0.66Down
Larval carcass195 ± 374 of 4 0.61Down
S2 cells (growing)443 ± 164 of 4 1.38Up
Whole fly320 ± 134 of 4

Looking for FBgn0040237. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime